Antti Takolander , Louise Forsblom , Seppo Hellsten , Jari Ilmonen , Ari-Pekka Jokinen , Niko Kallio , Sampsa Koponen , Sakari Väkevä , Elina Virtanen
{"title":"物种分布模型的跨域可转移性--物种特征和流行程度比应用的建模方法更重要","authors":"Antti Takolander , Louise Forsblom , Seppo Hellsten , Jari Ilmonen , Ari-Pekka Jokinen , Niko Kallio , Sampsa Koponen , Sakari Väkevä , Elina Virtanen","doi":"10.1016/j.ecolmodel.2024.110950","DOIUrl":null,"url":null,"abstract":"<div><div>Species Distribution Models (SDMs) are frequently applied in ecological research, but geographic transferability of SDMs holds major uncertainties. Here, we assess the cross-realm (sea to lake) geographic transferability of four SDM methods: Generalized Linear Models (GLMs), Generalized Additive Models (GAMs), Boosted Regression Trees (BRTs), and Bayesian Additive Regression Trees (BARTs) predicting occurrences of freshwater macrophytes from brackish water sea area (Bothnian Bay) to a freshwater lake environment in Finland. We found that the SDM method applied did not affect model transferability, and majority of the variation in transferability performance was associated with species. For most species model transferability was low, but reasonably good on one third of the species modelled, which had similar prevalences in both marine and freshwater data. These were emergent species or species growing close to shoreline, which presumably share similar environmental niche in terms of growing depth and water turbidity between the two environments. Generally, models which had high interpolation performance, also had higher transferability, but this relationship was not dependent on the SDM method applied. Our results suggest that species prevalence and species-specific characteristics, such as growth form, life history traits and ecological niche, are main contributors to geographic transferability of SDMs.</div></div>","PeriodicalId":51043,"journal":{"name":"Ecological Modelling","volume":"499 ","pages":"Article 110950"},"PeriodicalIF":2.6000,"publicationDate":"2024-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Cross-realm transferability of species distribution models–Species characteristics and prevalence matter more than modelling methods applied\",\"authors\":\"Antti Takolander , Louise Forsblom , Seppo Hellsten , Jari Ilmonen , Ari-Pekka Jokinen , Niko Kallio , Sampsa Koponen , Sakari Väkevä , Elina Virtanen\",\"doi\":\"10.1016/j.ecolmodel.2024.110950\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Species Distribution Models (SDMs) are frequently applied in ecological research, but geographic transferability of SDMs holds major uncertainties. Here, we assess the cross-realm (sea to lake) geographic transferability of four SDM methods: Generalized Linear Models (GLMs), Generalized Additive Models (GAMs), Boosted Regression Trees (BRTs), and Bayesian Additive Regression Trees (BARTs) predicting occurrences of freshwater macrophytes from brackish water sea area (Bothnian Bay) to a freshwater lake environment in Finland. We found that the SDM method applied did not affect model transferability, and majority of the variation in transferability performance was associated with species. For most species model transferability was low, but reasonably good on one third of the species modelled, which had similar prevalences in both marine and freshwater data. These were emergent species or species growing close to shoreline, which presumably share similar environmental niche in terms of growing depth and water turbidity between the two environments. Generally, models which had high interpolation performance, also had higher transferability, but this relationship was not dependent on the SDM method applied. Our results suggest that species prevalence and species-specific characteristics, such as growth form, life history traits and ecological niche, are main contributors to geographic transferability of SDMs.</div></div>\",\"PeriodicalId\":51043,\"journal\":{\"name\":\"Ecological Modelling\",\"volume\":\"499 \",\"pages\":\"Article 110950\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2024-11-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Ecological Modelling\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0304380024003387\",\"RegionNum\":3,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecological Modelling","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0304380024003387","RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ECOLOGY","Score":null,"Total":0}
Cross-realm transferability of species distribution models–Species characteristics and prevalence matter more than modelling methods applied
Species Distribution Models (SDMs) are frequently applied in ecological research, but geographic transferability of SDMs holds major uncertainties. Here, we assess the cross-realm (sea to lake) geographic transferability of four SDM methods: Generalized Linear Models (GLMs), Generalized Additive Models (GAMs), Boosted Regression Trees (BRTs), and Bayesian Additive Regression Trees (BARTs) predicting occurrences of freshwater macrophytes from brackish water sea area (Bothnian Bay) to a freshwater lake environment in Finland. We found that the SDM method applied did not affect model transferability, and majority of the variation in transferability performance was associated with species. For most species model transferability was low, but reasonably good on one third of the species modelled, which had similar prevalences in both marine and freshwater data. These were emergent species or species growing close to shoreline, which presumably share similar environmental niche in terms of growing depth and water turbidity between the two environments. Generally, models which had high interpolation performance, also had higher transferability, but this relationship was not dependent on the SDM method applied. Our results suggest that species prevalence and species-specific characteristics, such as growth form, life history traits and ecological niche, are main contributors to geographic transferability of SDMs.
期刊介绍:
The journal is concerned with the use of mathematical models and systems analysis for the description of ecological processes and for the sustainable management of resources. Human activity and well-being are dependent on and integrated with the functioning of ecosystems and the services they provide. We aim to understand these basic ecosystem functions using mathematical and conceptual modelling, systems analysis, thermodynamics, computer simulations, and ecological theory. This leads to a preference for process-based models embedded in theory with explicit causative agents as opposed to strictly statistical or correlative descriptions. These modelling methods can be applied to a wide spectrum of issues ranging from basic ecology to human ecology to socio-ecological systems. The journal welcomes research articles, short communications, review articles, letters to the editor, book reviews, and other communications. The journal also supports the activities of the [International Society of Ecological Modelling (ISEM)](http://www.isemna.org/).