埃塞俄比亚结核病-人类免疫缺陷病毒共同感染的贝叶斯分层时空模型

IF 2.7 Q2 MULTIDISCIPLINARY SCIENCES
Legesse Kassa Debusho, Leta Lencha Gemechu
{"title":"埃塞俄比亚结核病-人类免疫缺陷病毒共同感染的贝叶斯分层时空模型","authors":"Legesse Kassa Debusho,&nbsp;Leta Lencha Gemechu","doi":"10.1016/j.sciaf.2024.e02460","DOIUrl":null,"url":null,"abstract":"<div><div>Understanding the epidemiological patterns of tuberculosis-human immunodeficiency virus (TB-HIV) co-infection over space and time is crucial because it assists in identifying areas with high risks that need special control strategies. This article aimed to determine districts in Ethiopia that are most vulnerable to TB-HIV co-infection by examining the spatiotemporal patterns of the co-infection across four years, from 2015 to 2018. The study’s data came from Ethiopia’s Federal Ministry of Health. The data was analysed by applying the Bayesian hierarchical spatiotemporal modelling. We considered four models with different space–time interaction structures via the Integrated Nested Laplace Approximation (INLA) in the R-INLA package. In addition, we have applied the Deviance Information Criterion to select the most suitable model. The mean raw annual TB-HIV relative risk (RR) continuously decreased from 2015 to 2018, and the raw RRs of co-infection varied over districts and years. The spatiotemporal model, which allows for space–time interaction with independent spatial random effect and dependent temporal random effect, was the preferred model for describing the variations in TB-HIV co-infection across different districts over time. The prior variance for the spatial structured random effect had a smaller precision mode than the spatial unstructured random effect. This difference reveals that the former accounted for more spatial autocorrelation than the latter, indicating an information-borrowing effect amongst districts. Furthermore, the findings exhibit that the relative risk of TB-HIV co-infection had significant spatiotemporal variation and clustering. Through this research, further information was obtained regarding the temporal evolution of the geographical spread of TB and HIV co-infection at the district level in the country. It also made it possible to determine districts that should receive priority for control actions because of their high risk of co-infection.</div></div>","PeriodicalId":21690,"journal":{"name":"Scientific African","volume":"26 ","pages":"Article e02460"},"PeriodicalIF":2.7000,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Bayesian hierarchical spatiotemporal modelling of tuberculosis—Human immunodeficiency virus co-infection in Ethiopia\",\"authors\":\"Legesse Kassa Debusho,&nbsp;Leta Lencha Gemechu\",\"doi\":\"10.1016/j.sciaf.2024.e02460\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Understanding the epidemiological patterns of tuberculosis-human immunodeficiency virus (TB-HIV) co-infection over space and time is crucial because it assists in identifying areas with high risks that need special control strategies. This article aimed to determine districts in Ethiopia that are most vulnerable to TB-HIV co-infection by examining the spatiotemporal patterns of the co-infection across four years, from 2015 to 2018. The study’s data came from Ethiopia’s Federal Ministry of Health. The data was analysed by applying the Bayesian hierarchical spatiotemporal modelling. We considered four models with different space–time interaction structures via the Integrated Nested Laplace Approximation (INLA) in the R-INLA package. In addition, we have applied the Deviance Information Criterion to select the most suitable model. The mean raw annual TB-HIV relative risk (RR) continuously decreased from 2015 to 2018, and the raw RRs of co-infection varied over districts and years. The spatiotemporal model, which allows for space–time interaction with independent spatial random effect and dependent temporal random effect, was the preferred model for describing the variations in TB-HIV co-infection across different districts over time. The prior variance for the spatial structured random effect had a smaller precision mode than the spatial unstructured random effect. This difference reveals that the former accounted for more spatial autocorrelation than the latter, indicating an information-borrowing effect amongst districts. Furthermore, the findings exhibit that the relative risk of TB-HIV co-infection had significant spatiotemporal variation and clustering. Through this research, further information was obtained regarding the temporal evolution of the geographical spread of TB and HIV co-infection at the district level in the country. It also made it possible to determine districts that should receive priority for control actions because of their high risk of co-infection.</div></div>\",\"PeriodicalId\":21690,\"journal\":{\"name\":\"Scientific African\",\"volume\":\"26 \",\"pages\":\"Article e02460\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-11-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Scientific African\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2468227624004022\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Scientific African","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2468227624004022","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

摘要

了解结核病-人类免疫缺陷病毒(TB-HIV)合并感染在空间和时间上的流行病学模式至关重要,因为这有助于确定需要特殊控制策略的高风险地区。本文旨在通过研究 2015 年至 2018 年这四年中结核病-艾滋病毒合并感染的时空模式,确定埃塞俄比亚最易发生结核病-艾滋病毒合并感染的地区。研究数据来自埃塞俄比亚联邦卫生部。我们采用贝叶斯分层时空模型对数据进行了分析。我们通过 R-INLA 软件包中的集成嵌套拉普拉斯近似法(INLA)考虑了四种具有不同时空交互结构的模型。此外,我们还应用了偏差信息标准(Deviance Information Criterion)来选择最合适的模型。从 2015 年到 2018 年,TB-HIV 的年平均原始相对风险(RR)持续下降,而合并感染的原始 RR 随地区和年份的不同而变化。时空模型允许独立空间随机效应和依赖时间随机效应的时空交互作用,是描述不同地区结核病-艾滋病毒合并感染随时间变化的首选模型。与空间非结构随机效应相比,空间结构随机效应的先验方差具有更小的精确模式。这一差异表明,前者比后者考虑了更多的空间自相关性,表明各地区之间存在信息借用效应。此外,研究结果表明,肺结核-艾滋病毒合并感染的相对风险具有显著的时空变化和聚类。通过这项研究,我们进一步了解了结核病和艾滋病毒合并感染在全国各地区的地理分布的时间演变情况。研究还有助于确定哪些地区因合并感染风险高而应优先采取控制行动。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bayesian hierarchical spatiotemporal modelling of tuberculosis—Human immunodeficiency virus co-infection in Ethiopia
Understanding the epidemiological patterns of tuberculosis-human immunodeficiency virus (TB-HIV) co-infection over space and time is crucial because it assists in identifying areas with high risks that need special control strategies. This article aimed to determine districts in Ethiopia that are most vulnerable to TB-HIV co-infection by examining the spatiotemporal patterns of the co-infection across four years, from 2015 to 2018. The study’s data came from Ethiopia’s Federal Ministry of Health. The data was analysed by applying the Bayesian hierarchical spatiotemporal modelling. We considered four models with different space–time interaction structures via the Integrated Nested Laplace Approximation (INLA) in the R-INLA package. In addition, we have applied the Deviance Information Criterion to select the most suitable model. The mean raw annual TB-HIV relative risk (RR) continuously decreased from 2015 to 2018, and the raw RRs of co-infection varied over districts and years. The spatiotemporal model, which allows for space–time interaction with independent spatial random effect and dependent temporal random effect, was the preferred model for describing the variations in TB-HIV co-infection across different districts over time. The prior variance for the spatial structured random effect had a smaller precision mode than the spatial unstructured random effect. This difference reveals that the former accounted for more spatial autocorrelation than the latter, indicating an information-borrowing effect amongst districts. Furthermore, the findings exhibit that the relative risk of TB-HIV co-infection had significant spatiotemporal variation and clustering. Through this research, further information was obtained regarding the temporal evolution of the geographical spread of TB and HIV co-infection at the district level in the country. It also made it possible to determine districts that should receive priority for control actions because of their high risk of co-infection.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Scientific African
Scientific African Multidisciplinary-Multidisciplinary
CiteScore
5.60
自引率
3.40%
发文量
332
审稿时长
10 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信