Amjad Askary, Wei Chen, Junhong Choi, Lucia Y. Du, Michael B. Elowitz, James A. Gagnon, Alexander F. Schier, Sophie Seidel, Jay Shendure, Tanja Stadler, Martin Tran
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引用次数: 0
摘要
一种生物学模式正在出现,即通过基因编程,细胞可以将自己的历史写入自己的基因组。随后可以读取这些记录,并重建细胞的历史,每个细胞的历史可能包括其血统关系、外在影响、内部状态和物理位置的记录。DNA 记录有可能改变我们研究发育和疾病过程的方式。基因组工程的最新进展推动了 DNA 记录系统的发展,与此同时,单细胞和空间 omics 技术也越来越多地实现了记录信息的恢复。结合计算和系统发育推断算法的进步,DNA记录范式已初见成效。在本《视角》中,我们将探讨 DNA 记录的原理和技术基础、细胞生物学的哪些方面可以记录、如何记录,以及我们预计这种范式将促成的发现类型。
A paradigm for biology is emerging in which cells can be genetically programmed to write their histories into their own genomes. These records can subsequently be read, and the cellular histories reconstructed, which for each cell could include a record of its lineage relationships, extrinsic influences, internal states and physical locations, over time. DNA recording has the potential to transform the way that we study developmental and disease processes. Recent advances in genome engineering are driving the development of systems for DNA recording, and meanwhile single-cell and spatial omics technologies increasingly enable the recovery of the recorded information. Combined with advances in computational and phylogenetic inference algorithms, the DNA recording paradigm is beginning to bear fruit. In this Perspective, we explore the rationale and technical basis of DNA recording, what aspects of cellular biology might be recorded and how, and the types of discovery that we anticipate this paradigm will enable.
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