通过硅学方法研究毛果芸香科植物的生物活性化合物对肺动脉高压 Wnt/β 连环素通路蛋白的影响

In silico pharmacology Pub Date : 2024-11-19 eCollection Date: 2024-01-01 DOI:10.1007/s40203-024-00263-8
Supriya Bhosle, Shrilaxmi Bagali, Prachi P Parvatikar, Kusal K Das
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引用次数: 0

摘要

调节 Wnt/β-catenin 信号通路有助于发现有效治疗肺动脉高压(PAH)的新药物。考虑到白千层对多种疾病的治疗潜力,本研究旨在通过硅学分析,针对 Wnt 3a、Frizzled 1、LRP 5/6、β-catenin、Disheveled、细胞周期蛋白 D1 等不同成分,分析白千层植物种子中不同生物活性化合物与 Wnt/β-catenin 通路的相互作用。建议的工作基于瑞士 ADME 服务器的计算分析,包括 ADME/T 特性。为了了解分子相互作用模式,我们使用了 Schrodinger 软件来预测白豆蔻生物活性分子与参与 Wnt/ β 连环素通路的目标蛋白之间的相互作用。然后,在 Desmond 中对顶端对接复合物的模拟模式进行了 100 ns 的 MD 模拟。从毛果芸香科植物中提取的生物活性分子具有类似药物的特性,而且毒性极低。此外,对接研究显示,在九种化合物中,有三种化合物(没食子酸、左旋多巴和β-谷甾醇)与目标蛋白质有良好的相互作用。由于没食子酸与所有靶蛋白都表现出良好的相互作用,因此对对接复合物进行了 MD 模拟,从 RMSD 和 RMSF 的角度来看,该复合物在整个模拟时间内都很稳定。这些研究结果表明,杜仲化合物的生物活性分子在治疗肺血管疾病方面具有潜在的治疗价值。要确定其疗效并最终验证其药理活性,还需要进一步开展体内和体外研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Effect of bioactive compounds of Mucuna pruriens on proteins of Wnt/β catenin pathway in pulmonary hypertension by in silico approach.

Modulation of the Wnt/β-catenin signaling pathway may aid in discovering new medications for the effective management of pulmonary artery hypertension (PAH). Given the therapeutic potential of Mucuna pruriens in several diseases, the present study aimed to analyze interactions of different bioactive compounds of Mucuna pruriens plant seeds with Wnt/β-catenin pathway targeting its various components like Wnt 3a, Frizzled 1, LRP 5/6, β-catenin, Disheveled, cyclin D1 by in silico analysis. The proposed work is based on computational analysis including ADME/T properties, by a Swiss ADME server. To understand the molecular interaction pattern Schrodinger, suit a stand-alone software was used to predict the interaction of bioactive molecules of Mucuna Pruriens with target proteins that are involved in Wnt/ β catenin pathway. Further, the simulation pattern of the top docked complex was subjected to MD simulation in Desmond for 100 ns. Bioactive molecules from Mucuna Pruriens have drug-like properties and minimal toxicity. Further, the docking study revealed that among the nine compounds, three compounds (Gallic acid, L-dopa, and β-sitosterol) showed good interaction with target proteins. As gallic acid showed good interaction with all target proteins, the docked complex was subjected to MD simulation which was stable throughout the simulation time in terms of RMSD and RMSF. These findings suggest that the bioactive molecules of Mucuna pruriens compounds have potential therapeutic value in the treatment of pulmonary vascular disease. Further, in vivo and in vitro studies are necessary to determine its efficacy and validate its pharmacological activity conclusively.

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