{"title":"计算方法:通过 QSAR 建模预测治疗阿尔茨海默病的化合物对 iNOS 的抑制作用","authors":"Shkar Mariwan Ahmed, Gulcin Tugcu, Meric Köksal","doi":"10.1002/slct.202400091","DOIUrl":null,"url":null,"abstract":"<p>This article presents the development of a quantitative structure-activity relationship (QSAR) model for predicting the inhibitory activity of inducible nitric oxide synthase (iNOS) by specific compounds used in Alzheimer's disease treatment. iNOS is a vital enzyme involved in nitric oxide (NO) production, contributing to neuroinflammation and neuronal damage in Alzheimer's disease. The QSAR model was developed using a dataset of 90 compounds with known iNOS inhibition activity. Molecular descriptors representing the compounds’ structural and physicochemical properties were calculated and employed as input variables. Five descriptors (MATS6p, Chi1_EA(dm), Mor17 s, NsssCH, and SHED_AL) were selected as optimal for developing the classification model. The Random Forest algorithm was chosen as the classifier, implemented using WEKA software. The model underwent rigorous internal and external validation to assess its performance. The resulting QSAR model exhibited outstanding predictive capabilities with an overall accuracy of 88.8 %, a high correlation coefficient, and minimal prediction errors. It effectively forecasts iNOS inhibition activity of the chosen compounds, offering valuable insights for potential Alzheimer's disease treatments. This model significantly contributes to drug discovery, providing a rapid and cost-effective means of screening and prioritizing compounds with iNOS inhibitory potential.</p>","PeriodicalId":146,"journal":{"name":"ChemistrySelect","volume":"9 44","pages":""},"PeriodicalIF":1.9000,"publicationDate":"2024-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A Computational Approach: Predicting iNOS Inhibition of Compounds for Alzheimer's Disease Treatment Through QSAR Modeling\",\"authors\":\"Shkar Mariwan Ahmed, Gulcin Tugcu, Meric Köksal\",\"doi\":\"10.1002/slct.202400091\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>This article presents the development of a quantitative structure-activity relationship (QSAR) model for predicting the inhibitory activity of inducible nitric oxide synthase (iNOS) by specific compounds used in Alzheimer's disease treatment. iNOS is a vital enzyme involved in nitric oxide (NO) production, contributing to neuroinflammation and neuronal damage in Alzheimer's disease. The QSAR model was developed using a dataset of 90 compounds with known iNOS inhibition activity. Molecular descriptors representing the compounds’ structural and physicochemical properties were calculated and employed as input variables. Five descriptors (MATS6p, Chi1_EA(dm), Mor17 s, NsssCH, and SHED_AL) were selected as optimal for developing the classification model. The Random Forest algorithm was chosen as the classifier, implemented using WEKA software. The model underwent rigorous internal and external validation to assess its performance. The resulting QSAR model exhibited outstanding predictive capabilities with an overall accuracy of 88.8 %, a high correlation coefficient, and minimal prediction errors. It effectively forecasts iNOS inhibition activity of the chosen compounds, offering valuable insights for potential Alzheimer's disease treatments. This model significantly contributes to drug discovery, providing a rapid and cost-effective means of screening and prioritizing compounds with iNOS inhibitory potential.</p>\",\"PeriodicalId\":146,\"journal\":{\"name\":\"ChemistrySelect\",\"volume\":\"9 44\",\"pages\":\"\"},\"PeriodicalIF\":1.9000,\"publicationDate\":\"2024-11-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ChemistrySelect\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/slct.202400091\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ChemistrySelect","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/slct.202400091","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
A Computational Approach: Predicting iNOS Inhibition of Compounds for Alzheimer's Disease Treatment Through QSAR Modeling
This article presents the development of a quantitative structure-activity relationship (QSAR) model for predicting the inhibitory activity of inducible nitric oxide synthase (iNOS) by specific compounds used in Alzheimer's disease treatment. iNOS is a vital enzyme involved in nitric oxide (NO) production, contributing to neuroinflammation and neuronal damage in Alzheimer's disease. The QSAR model was developed using a dataset of 90 compounds with known iNOS inhibition activity. Molecular descriptors representing the compounds’ structural and physicochemical properties were calculated and employed as input variables. Five descriptors (MATS6p, Chi1_EA(dm), Mor17 s, NsssCH, and SHED_AL) were selected as optimal for developing the classification model. The Random Forest algorithm was chosen as the classifier, implemented using WEKA software. The model underwent rigorous internal and external validation to assess its performance. The resulting QSAR model exhibited outstanding predictive capabilities with an overall accuracy of 88.8 %, a high correlation coefficient, and minimal prediction errors. It effectively forecasts iNOS inhibition activity of the chosen compounds, offering valuable insights for potential Alzheimer's disease treatments. This model significantly contributes to drug discovery, providing a rapid and cost-effective means of screening and prioritizing compounds with iNOS inhibitory potential.
期刊介绍:
ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.