计算方法:通过 QSAR 建模预测治疗阿尔茨海默病的化合物对 iNOS 的抑制作用

IF 1.9 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Shkar Mariwan Ahmed, Gulcin Tugcu, Meric Köksal
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引用次数: 0

摘要

iNOS 是一种参与一氧化氮 (NO) 生成的重要酶,在阿尔茨海默病中导致神经炎症和神经元损伤。该 QSAR 模型是利用 90 种已知具有 iNOS 抑制活性的化合物数据集开发的。计算了代表化合物结构和理化性质的分子描述符,并将其作为输入变量。选择了五个描述符(MATS6p、Chi1_EA(dm)、Mor17 s、NsssCH 和 SHED_AL)作为建立分类模型的最佳描述符。随机森林算法被选为分类器,使用 WEKA 软件实现。该模型经过了严格的内部和外部验证,以评估其性能。结果表明,QSAR 模型具有出色的预测能力,总体准确率达 88.8%,相关系数高,预测误差极小。它有效地预测了所选化合物的 iNOS 抑制活性,为潜在的阿尔茨海默病治疗提供了宝贵的见解。该模型为具有 iNOS 抑制潜力的化合物的筛选和优先排序提供了一种快速、经济高效的方法,为药物发现做出了重大贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A Computational Approach: Predicting iNOS Inhibition of Compounds for Alzheimer's Disease Treatment Through QSAR Modeling

A Computational Approach: Predicting iNOS Inhibition of Compounds for Alzheimer's Disease Treatment Through QSAR Modeling

This article presents the development of a quantitative structure-activity relationship (QSAR) model for predicting the inhibitory activity of inducible nitric oxide synthase (iNOS) by specific compounds used in Alzheimer's disease treatment. iNOS is a vital enzyme involved in nitric oxide (NO) production, contributing to neuroinflammation and neuronal damage in Alzheimer's disease. The QSAR model was developed using a dataset of 90 compounds with known iNOS inhibition activity. Molecular descriptors representing the compounds’ structural and physicochemical properties were calculated and employed as input variables. Five descriptors (MATS6p, Chi1_EA(dm), Mor17 s, NsssCH, and SHED_AL) were selected as optimal for developing the classification model. The Random Forest algorithm was chosen as the classifier, implemented using WEKA software. The model underwent rigorous internal and external validation to assess its performance. The resulting QSAR model exhibited outstanding predictive capabilities with an overall accuracy of 88.8 %, a high correlation coefficient, and minimal prediction errors. It effectively forecasts iNOS inhibition activity of the chosen compounds, offering valuable insights for potential Alzheimer's disease treatments. This model significantly contributes to drug discovery, providing a rapid and cost-effective means of screening and prioritizing compounds with iNOS inhibitory potential.

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来源期刊
ChemistrySelect
ChemistrySelect Chemistry-General Chemistry
CiteScore
3.30
自引率
4.80%
发文量
1809
审稿时长
1.6 months
期刊介绍: ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.
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