PubChem 2025 更新。

IF 16.6 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A Shoemaker, Paul A Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan E Bolton
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引用次数: 0

摘要

PubChem (https://pubchem.ncbi.nlm.nih.gov) 是美国国立卫生研究院的一个大型、高度集成的公共化学数据库资源。在过去两年中,PubChem 进行了重大更新。由于新增了 130 多个数据源,PubChem 包含超过 1000 个数据源、1.19 亿种化合物、3.22 亿种物质和 2.95 亿种生物活性物质。开发了新的界面,如综合文献面板和专利知识面板。合并文献面板将有关化合物的所有参考文献合并到一个列表中,使用户可以在一个地方轻松查找、排序和导出有关化学品的所有相关文章。针对给定查询化学品或基因的专利知识面板显示了专利文献中与该查询共同提及的化学品、基因和疾病,帮助用户探索专利文献中共同出现的实体之间的关系。PubChemRDF 已扩展到包括文献知识面板基础的共现数据,使用户能够利用语义网技术,根据科学文献中的共现情况探索实体关系。有关非离散结构化学品(如生物制品、矿物、聚合物、UVCB 和聚糖)信息的可用性和可访问性得到了极大改善,专门的网页提供了 PubChem 中有关这些化学品的所有可用信息的综合视图。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PubChem 2025 update.

PubChem (https://pubchem.ncbi.nlm.nih.gov) is a large and highly-integrated public chemical database resource at NIH. In the past two years, significant updates were made to PubChem. With additions from over 130 new sources, PubChem contains >1000 data sources, 119 million compounds, 322 million substances and 295 million bioactivities. New interfaces, such as the consolidated literature panel and the patent knowledge panel, were developed. The consolidated literature panel combines all references about a compound into a single list, allowing users to easily find, sort, and export all relevant articles for a chemical in one place. The patent knowledge panels for a given query chemical or gene display chemicals, genes, and diseases co-mentioned with the query in patent documents, helping users to explore relationships between co-occurring entities within patent documents. PubChemRDF was expanded to include the co-occurrence data underlying the literature knowledge panel, enabling users to exploit semantic web technologies to explore entity relationships based on the co-occurrences in the scientific literature. The usability and accessibility of information on chemicals with non-discrete structures (e.g. biologics, minerals, polymers, UVCBs and glycans) were greatly improved with dedicated web pages that provide a comprehensive view of all available information in PubChem for these chemicals.

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来源期刊
Nucleic Acids Research
Nucleic Acids Research 生物-生化与分子生物学
CiteScore
27.10
自引率
4.70%
发文量
1057
审稿时长
2 months
期刊介绍: Nucleic Acids Research (NAR) is a scientific journal that publishes research on various aspects of nucleic acids and proteins involved in nucleic acid metabolism and interactions. It covers areas such as chemistry and synthetic biology, computational biology, gene regulation, chromatin and epigenetics, genome integrity, repair and replication, genomics, molecular biology, nucleic acid enzymes, RNA, and structural biology. The journal also includes a Survey and Summary section for brief reviews. Additionally, each year, the first issue is dedicated to biological databases, and an issue in July focuses on web-based software resources for the biological community. Nucleic Acids Research is indexed by several services including Abstracts on Hygiene and Communicable Diseases, Animal Breeding Abstracts, Agricultural Engineering Abstracts, Agbiotech News and Information, BIOSIS Previews, CAB Abstracts, and EMBASE.
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