Samrawit G Gebre, Ryan T Scott, Amanda M Saravia-Butler, Danielle K Lopez, Lauren M Sanders, Sylvain V Costes
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引用次数: 0
摘要
空间生物学和健康数据对于深空任务的成功和人类在地球外的可持续存在至关重要。有效管理生物医学风险的核心是致力于开放科学原则,确保数据可查找、可访问、可互操作、可重复使用、可复制和最大限度地开放。2021 年,艾姆斯生命科学数据档案馆与 GeneLab 整合,建立了 NASA 开放科学数据存储库,大大提高了对来自 GeneLab 的现有 "omics "数据以及各种生命科学、生物医学-临床和任务遥测数据的访问。本文介绍了新的数据库、其架构和新的数据流,支持多种数据类型,并加强了数据提交、检索和分析。其特点包括用于改进数据提交的生物数据管理环境、新的用户界面、受控数据访问、增强型应用程序接口以及用于环境遥感测量、辐射剂量测定数据和'omics'分析的综合公共可视化工具。通过其分析工作组和培训计划促进全球合作,开放科学数据储存库推动了空间生物学的广泛参与,确保了研究的透明度和包容性。它支持全球科学界进一步了解太空飞行对生物系统的影响,确保人类在未来的深空任务中茁壮成长。
NASA open science data repository: open science for life in space.
Space biology and health data are critical for the success of deep space missions and sustainable human presence off-world. At the core of effectively managing biomedical risks is the commitment to open science principles, which ensure that data are findable, accessible, interoperable, reusable, reproducible and maximally open. The 2021 integration of the Ames Life Sciences Data Archive with GeneLab to establish the NASA Open Science Data Repository significantly enhanced access to a wide range of life sciences, biomedical-clinical and mission telemetry data alongside existing 'omics data from GeneLab. This paper describes the new database, its architecture and new data streams supporting diverse data types and enhancing data submission, retrieval and analysis. Features include the biological data management environment for improved data submission, a new user interface, controlled data access, an enhanced API and comprehensive public visualization tools for environmental telemetry, radiation dosimetry data and 'omics analyses. By fostering global collaboration through its analysis working groups and training programs, the open science data repository promotes widespread engagement in space biology, ensuring transparency and inclusivity in research. It supports the global scientific community in advancing our understanding of spaceflight's impact on biological systems, ensuring humans will thrive in future deep space missions.
期刊介绍:
Nucleic Acids Research (NAR) is a scientific journal that publishes research on various aspects of nucleic acids and proteins involved in nucleic acid metabolism and interactions. It covers areas such as chemistry and synthetic biology, computational biology, gene regulation, chromatin and epigenetics, genome integrity, repair and replication, genomics, molecular biology, nucleic acid enzymes, RNA, and structural biology. The journal also includes a Survey and Summary section for brief reviews. Additionally, each year, the first issue is dedicated to biological databases, and an issue in July focuses on web-based software resources for the biological community. Nucleic Acids Research is indexed by several services including Abstracts on Hygiene and Communicable Diseases, Animal Breeding Abstracts, Agricultural Engineering Abstracts, Agbiotech News and Information, BIOSIS Previews, CAB Abstracts, and EMBASE.