机器学习揭示了增强乳腺癌治疗的关键氧化还原特征。

IF 5.3 2区 医学 Q1 ONCOLOGY
Tao Wang, Shu Wang, Zhuolin Li, Jie Xie, Kuiying Du, Jing Hou
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引用次数: 0

摘要

背景:乳腺癌仍然是全球妇女死亡的主要原因:乳腺癌仍然是全球妇女死亡的主要原因,因此需要创新的预后模型来加强治疗策略:我们的研究从12个独立数据集和12名患者(64308个细胞)的单细胞数据中回顾性地收集了9439名乳腺癌患者。此外,还收集了 30 个内部临床队列进行验证。我们采用了一种综合方法,通过 108 种不同的组合,将 10 种不同的机器学习算法结合起来,仔细研究了 88 种乳腺癌的已有特征。为了证实我们开发的模型的有效性,我们进行了免疫组化检测。此外,我们还研究了各种潜在的免疫治疗和化疗干预措施:本研究将人工智能辅助氧化还原特征(AIARS)作为一种新型预后工具,利用机器学习识别乳腺癌中关键的氧化还原相关基因特征。我们的研究结果表明,人工智能辅助氧化还原特征在预测乳腺癌预后方面明显优于现有的预后模型,为个性化治疗规划提供了一个强大的工具。通过对 30 名患者的样本进行免疫组化检测验证,证实了我们的结果,突出了该模型在更大范围内的适用性。此外,分析还显示,AIARS表达水平低的患者对免疫疗法的反应更强。相反,AIARS表达水平高的患者则更容易受到包括长春新碱在内的某些化疗药物的影响:我们的研究强调了氧化还原生物学在乳腺癌预后中的重要性,并为个性化治疗策略引入了一个强大的基于机器学习的工具--AIARS。AIARS 提供了对乳腺癌氧化还原环境更细致入微的了解,为开发氧化还原靶向疗法铺平了道路,有望显著改善患者的预后。未来的工作将侧重于临床验证和探索已鉴定基因在癌症生物学中的机理作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine learning unveils key Redox signatures for enhanced breast Cancer therapy.

Background: Breast cancer remains a leading cause of mortality among women worldwide, necessitating innovative prognostic models to enhance treatment strategies.

Methods: Our study retrospectively enrolled 9,439 breast cancer patients from 12 independent datasets and single-cell data from 12 patients (64,308 cells). Moverover, 30 in-house clinical cohort were collected for validation. We employed a comprehensive approach by combining ten distinct machine learning algorithms across 108 different combinations to scrutinize 88 pre-existing signatures of breast cancer. To affirm the efficacy of our developed model, immunohistochemistry assays were performed. Additionally, we investigated various potential immunotherapeutic and chemotherapeutic interventions.

Results: This study introduces an Artificial Intelligence-aided Redox Signature (AIARS) as a novel prognostic tool, leveraging machine learning to identify critical redox-related gene signatures in breast cancer. Our results demonstrate that AIARS significantly outperforms existing prognostic models in predicting breast cancer outcomes, offering a robust tool for personalized treatment planning. Validation through immunohistochemistry assays on samples from 30 patients corroborated our results, underscoring the model's applicability on a wider scale. Furthermore, the analysis revealed that patients with low AIARS expression levels are more responsive to immunotherapy. Conversely, those exhibiting high AIARS were found to be more susceptible to certain chemotherapeutic agents, including vincristine.

Conclusions: Our study underscores the importance of redox biology in breast cancer prognosis and introduces a powerful machine learning-based tool, the AIARS, for personalized treatment strategies. By providing a more nuanced understanding of the redox landscape in breast cancer, the AIARS paves the way for the development of redox-targeted therapies, promising to enhance patient outcomes significantly. Future work will focus on clinical validation and exploring the mechanistic roles of identified genes in cancer biology.

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来源期刊
CiteScore
10.90
自引率
1.70%
发文量
360
审稿时长
1 months
期刊介绍: Cancer Cell International publishes articles on all aspects of cancer cell biology, originating largely from, but not limited to, work using cell culture techniques. The journal focuses on novel cancer studies reporting data from biological experiments performed on cells grown in vitro, in two- or three-dimensional systems, and/or in vivo (animal experiments). These types of experiments have provided crucial data in many fields, from cell proliferation and transformation, to epithelial-mesenchymal interaction, to apoptosis, and host immune response to tumors. Cancer Cell International also considers articles that focus on novel technologies or novel pathways in molecular analysis and on epidemiological studies that may affect patient care, as well as articles reporting translational cancer research studies where in vitro discoveries are bridged to the clinic. As such, the journal is interested in laboratory and animal studies reporting on novel biomarkers of tumor progression and response to therapy and on their applicability to human cancers.
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