土耳其小型哺乳动物中的巴顿氏菌:从乌拉尔田鼠(Apodemus uralensis)身上分离出的 Bartonella bilalgolemii sp.

IF 1.8 4区 医学 Q3 INFECTIOUS DISEASES
Bekir Çelebi, Rita Zgheib, Ahmet Karataş, Cahit Babür, İbrahim Mehmet Ali Öktem, Ferhat Matur, Mustafa Sözen, Bernard Davoust, Oleg Mediannikov, Pierre-Edouard Fournier
{"title":"土耳其小型哺乳动物中的巴顿氏菌:从乌拉尔田鼠(Apodemus uralensis)身上分离出的 Bartonella bilalgolemii sp.","authors":"Bekir Çelebi, Rita Zgheib, Ahmet Karataş, Cahit Babür, İbrahim Mehmet Ali Öktem, Ferhat Matur, Mustafa Sözen, Bernard Davoust, Oleg Mediannikov, Pierre-Edouard Fournier","doi":"10.1089/vbz.2024.0026","DOIUrl":null,"url":null,"abstract":"<p><p><b><i>Background:</i></b> The genus <i>Bartonella</i> is composed of Gram-negative, fastidious, facultative intracellular bacteria that can cause bacteremia in mammals and various disorders in humans. Rodents have been reported as reservoirs of more than 30 <i>Bartonella</i> species, seven of which cause zoonotic infections. <b><i>Materials and Methods:</i></b> In the present study, the isolation of <i>Bartonella</i> sp. was attempted from 150 spleen samples from 13 rodent species (mostly <i>Apodemus</i> species) from three geographically different regions in Turkey. <b><i>Results:</i></b> <i>Bartonella</i> sp. was successfully isolated from 65 of these 150 samples (43%). The prevalences of <i>Bartonella</i> sp. in tested rodents in the regions of Giresun, Yozgat, and Burdur were 68%, 44%, and 16%, respectively. Using polymerase chain reaction/sequence analysis of the citrate synthase-coding gene (<i>gltA</i>), Bartonellaisolates were classified seven species including <i>B. taylorii</i>, <i>B. grahamii</i>, <i>B. birtlesii</i>, <i>B. mastomydis</i>, and three putatively new <i>Bartonella</i> species. We performed further identification techniques for one of the three <i>Bartonella</i> species that were different from the validated <i>Bartonella</i> species according to the <i>gltA</i> sequence analysis. <b><i>Conclusion:</i></b> Here, we report the genomic and phenotypic characterization of <i>Bartonella</i> sp. strain G70 that was isolated from the splenic tissue of an <i>Apodemus uralensis</i> (Pallas 1881), the Ural field mouse, captured in the Giresun region of northeastern Turkey. <i>Bartonella</i> sp. strainG70 (RSKK 22001) was characterized by whole genome and partial gene (<i>gltA</i>, 16S ribosomal RNA) sequencing and comparison, scanning electron microscopy, biochemical tests, and matrix-assisted laser desorption ionization time-of-flight mass spectrometry. This novel <i>Bartonella</i> is a Gram-negative, rod-shaped bacterium and has neither flagella nor pili. The genome from strain G70 was 1,606,969-bp-long with a G + C content of 35.7%. <i>Bartonella rochalimae</i> was found to be the closest phylogenetic relative of strain G70 (OrthoANI = 90.5%, digital DNA-DNA hybridization = 41.4%). We therefore propose that this new species be named <i>Bartonella bilalgolemii</i> sp. nov. with strain G70<sup>T</sup> as the type strain.</p>","PeriodicalId":23683,"journal":{"name":"Vector borne and zoonotic diseases","volume":" ","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2024-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Bartonella</i> Species in Small Mammals in Turkey: <i>Bartonella bilalgolemii</i> sp. nov. Isolated from a Ural Field Mouse (<i>Apodemus uralensis)</i>.\",\"authors\":\"Bekir Çelebi, Rita Zgheib, Ahmet Karataş, Cahit Babür, İbrahim Mehmet Ali Öktem, Ferhat Matur, Mustafa Sözen, Bernard Davoust, Oleg Mediannikov, Pierre-Edouard Fournier\",\"doi\":\"10.1089/vbz.2024.0026\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><b><i>Background:</i></b> The genus <i>Bartonella</i> is composed of Gram-negative, fastidious, facultative intracellular bacteria that can cause bacteremia in mammals and various disorders in humans. Rodents have been reported as reservoirs of more than 30 <i>Bartonella</i> species, seven of which cause zoonotic infections. <b><i>Materials and Methods:</i></b> In the present study, the isolation of <i>Bartonella</i> sp. was attempted from 150 spleen samples from 13 rodent species (mostly <i>Apodemus</i> species) from three geographically different regions in Turkey. <b><i>Results:</i></b> <i>Bartonella</i> sp. was successfully isolated from 65 of these 150 samples (43%). The prevalences of <i>Bartonella</i> sp. in tested rodents in the regions of Giresun, Yozgat, and Burdur were 68%, 44%, and 16%, respectively. Using polymerase chain reaction/sequence analysis of the citrate synthase-coding gene (<i>gltA</i>), Bartonellaisolates were classified seven species including <i>B. taylorii</i>, <i>B. grahamii</i>, <i>B. birtlesii</i>, <i>B. mastomydis</i>, and three putatively new <i>Bartonella</i> species. We performed further identification techniques for one of the three <i>Bartonella</i> species that were different from the validated <i>Bartonella</i> species according to the <i>gltA</i> sequence analysis. <b><i>Conclusion:</i></b> Here, we report the genomic and phenotypic characterization of <i>Bartonella</i> sp. strain G70 that was isolated from the splenic tissue of an <i>Apodemus uralensis</i> (Pallas 1881), the Ural field mouse, captured in the Giresun region of northeastern Turkey. <i>Bartonella</i> sp. strainG70 (RSKK 22001) was characterized by whole genome and partial gene (<i>gltA</i>, 16S ribosomal RNA) sequencing and comparison, scanning electron microscopy, biochemical tests, and matrix-assisted laser desorption ionization time-of-flight mass spectrometry. This novel <i>Bartonella</i> is a Gram-negative, rod-shaped bacterium and has neither flagella nor pili. The genome from strain G70 was 1,606,969-bp-long with a G + C content of 35.7%. <i>Bartonella rochalimae</i> was found to be the closest phylogenetic relative of strain G70 (OrthoANI = 90.5%, digital DNA-DNA hybridization = 41.4%). We therefore propose that this new species be named <i>Bartonella bilalgolemii</i> sp. nov. with strain G70<sup>T</sup> as the type strain.</p>\",\"PeriodicalId\":23683,\"journal\":{\"name\":\"Vector borne and zoonotic diseases\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2024-10-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Vector borne and zoonotic diseases\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1089/vbz.2024.0026\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Vector borne and zoonotic diseases","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1089/vbz.2024.0026","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

摘要

背景:巴顿氏菌属由革兰氏阴性、繁殖快、细胞内兼性细菌组成,可导致哺乳动物菌血症和人类各种疾病。据报道,啮齿动物是 30 多种巴顿氏菌的贮藏地,其中 7 种会引起人畜共患病。材料和方法:本研究尝试从土耳其三个不同地区 13 种啮齿动物(主要是 Apodemus 种)的 150 份脾脏样本中分离巴顿氏菌。结果:在这 150 份样本中,有 65 份(43%)成功分离出巴顿氏杆菌。吉雷松、约兹加特和布尔杜尔地区受检啮齿动物的巴顿氏菌感染率分别为 68%、44% 和 16%。通过对柠檬酸合成酶编码基因(gltA)进行聚合酶链反应/序列分析,巴顿菌分离物被分为 7 个种,包括泰勒氏巴顿菌(B. taylorii)、格雷厄姆氏巴顿菌(B. grahamii)、伯特氏巴顿菌(B. birtlesii)、马斯托米迪氏巴顿菌(B. mastomydis)和 3 个推测的巴顿菌新种。根据 gltA 序列分析,我们对这三个巴顿菌种中的一个进行了进一步的鉴定。结论在此,我们报告了从土耳其东北部吉雷松地区捕获的乌拉尔田鼠 Apodemus uralensis (Pallas 1881) 脾脏组织中分离出的巴顿菌 G70 株的基因组和表型特征。通过全基因组和部分基因(gltA、16S 核糖体 RNA)测序和比较、扫描电子显微镜、生化测试和基质辅助激光解吸电离飞行时间质谱分析,对巴顿氏菌 G70 株(RSKK 22001)进行了鉴定。这种新型巴顿氏菌是一种革兰氏阴性、杆状细菌,既无鞭毛也无纤毛。菌株 G70 的基因组长 1,606,969 bp,G+C 含量为 35.7%。研究发现,罗沙利玛氏巴顿菌是 G70 菌株在系统发育上的近亲(OrthoANI = 90.5%,数字 DNA-DNA 杂交 = 41.4%)。因此,我们建议将这一新种命名为 Bartonella bilalgolemii sp.
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bartonella Species in Small Mammals in Turkey: Bartonella bilalgolemii sp. nov. Isolated from a Ural Field Mouse (Apodemus uralensis).

Background: The genus Bartonella is composed of Gram-negative, fastidious, facultative intracellular bacteria that can cause bacteremia in mammals and various disorders in humans. Rodents have been reported as reservoirs of more than 30 Bartonella species, seven of which cause zoonotic infections. Materials and Methods: In the present study, the isolation of Bartonella sp. was attempted from 150 spleen samples from 13 rodent species (mostly Apodemus species) from three geographically different regions in Turkey. Results: Bartonella sp. was successfully isolated from 65 of these 150 samples (43%). The prevalences of Bartonella sp. in tested rodents in the regions of Giresun, Yozgat, and Burdur were 68%, 44%, and 16%, respectively. Using polymerase chain reaction/sequence analysis of the citrate synthase-coding gene (gltA), Bartonellaisolates were classified seven species including B. taylorii, B. grahamii, B. birtlesii, B. mastomydis, and three putatively new Bartonella species. We performed further identification techniques for one of the three Bartonella species that were different from the validated Bartonella species according to the gltA sequence analysis. Conclusion: Here, we report the genomic and phenotypic characterization of Bartonella sp. strain G70 that was isolated from the splenic tissue of an Apodemus uralensis (Pallas 1881), the Ural field mouse, captured in the Giresun region of northeastern Turkey. Bartonella sp. strainG70 (RSKK 22001) was characterized by whole genome and partial gene (gltA, 16S ribosomal RNA) sequencing and comparison, scanning electron microscopy, biochemical tests, and matrix-assisted laser desorption ionization time-of-flight mass spectrometry. This novel Bartonella is a Gram-negative, rod-shaped bacterium and has neither flagella nor pili. The genome from strain G70 was 1,606,969-bp-long with a G + C content of 35.7%. Bartonella rochalimae was found to be the closest phylogenetic relative of strain G70 (OrthoANI = 90.5%, digital DNA-DNA hybridization = 41.4%). We therefore propose that this new species be named Bartonella bilalgolemii sp. nov. with strain G70T as the type strain.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
4.70
自引率
4.80%
发文量
73
审稿时长
3-8 weeks
期刊介绍: Vector-Borne and Zoonotic Diseases is an authoritative, peer-reviewed journal providing basic and applied research on diseases transmitted to humans by invertebrate vectors or non-human vertebrates. The Journal examines geographic, seasonal, and other risk factors that influence the transmission, diagnosis, management, and prevention of this group of infectious diseases, and identifies global trends that have the potential to result in major epidemics. Vector-Borne and Zoonotic Diseases coverage includes: -Ecology -Entomology -Epidemiology -Infectious diseases -Microbiology -Parasitology -Pathology -Public health -Tropical medicine -Wildlife biology -Bacterial, rickettsial, viral, and parasitic zoonoses
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信