多组学分析揭示了患有和未患有牙周炎的孕妇在口腔微生物群和代谢物方面的显著差异。

IF 2.9 3区 医学 Q2 INFECTIOUS DISEASES
Infection and Drug Resistance Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI:10.2147/IDR.S475164
Min Zhao, Changyi Yang, Linhong Zhu, Xiaoqian Guo, Haiyan Ma, Yuanhao Luo, Qi Wang, Juanjuan Chen
{"title":"多组学分析揭示了患有和未患有牙周炎的孕妇在口腔微生物群和代谢物方面的显著差异。","authors":"Min Zhao, Changyi Yang, Linhong Zhu, Xiaoqian Guo, Haiyan Ma, Yuanhao Luo, Qi Wang, Juanjuan Chen","doi":"10.2147/IDR.S475164","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Our study investigated the disparities and correlations between oral microbiota and metabolites in pregnant patients with and without periodontitis.</p><p><strong>Methods: </strong>Subgingival plaque samples from all subjects were collected for shotgun metagenomic sequencing and broad-target metabolomics analysis.</p><p><strong>Results: </strong>Forty pathogens, including <i>Porphyromonas gingivalis</i>, <i>Fusobacterium nucleatum</i>, <i>Eubacterium saphenum</i>, <i>Gemella morbillorum</i>, <i>Tannerella forsythia</i>, <i>Streptococcus anginosus</i> group, Selenomonas sputigena etc, were significantly enriched in pregnant patients with periodontitis (PPP). Conversely, symbiotic species such as <i>Morococcus cerebrosus</i>, <i>Streptococcus vestibularis</i>, <i>S.</i> <i>salivarius</i>, <i>S.</i> <i>mitis</i>, and <i>S.</i> <i>pneumoniae</i> were significantly more abundant in healthy controls (HCs). A total of 87 predicted functional modules (PFMs) exhibited significant differences between the two groups; eight PFMs showed high enrichment in PPP with involvement of PPP-enriched species within these pathways. The remaining 79 PFMs encompassing ribonucleotide biosynthesis, carbohydrate, and amino acid metabolism were highly abundant in HCs. For oral microbial metabolome, a total of 105 metabolites related to 150 KEGG pathways displayed significant differences between the two groups. Pathways such as pyruvate metabolism, folate biosynthesis, vascular smooth muscle contraction, and AMPK/mTOR signaling pathway along with their associated metabolites were found to be enriched in PPP, while carbohydrate metabolism predominated among HCs. Spearman's rank correlation analysis revealed significant positive associations between species enriched in PPP and metabolites enriched in PPP, but significant negative associations between species enriched in PPP and metabolites enriched in HCs.</p><p><strong>Discussion: </strong>Our findings provide potential biomarkers for distinguishing periodontitis during pregnancy while offering valuable insights into mechanisms exploration and clinical intervention.</p>","PeriodicalId":13577,"journal":{"name":"Infection and Drug Resistance","volume":"17 ","pages":"4665-4683"},"PeriodicalIF":2.9000,"publicationDate":"2024-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11520917/pdf/","citationCount":"0","resultStr":"{\"title\":\"Multiomics Analysis Reveals Significant Disparities in the Oral Microbiota and Metabolites Between Pregnant Women with and without Periodontitis.\",\"authors\":\"Min Zhao, Changyi Yang, Linhong Zhu, Xiaoqian Guo, Haiyan Ma, Yuanhao Luo, Qi Wang, Juanjuan Chen\",\"doi\":\"10.2147/IDR.S475164\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>Our study investigated the disparities and correlations between oral microbiota and metabolites in pregnant patients with and without periodontitis.</p><p><strong>Methods: </strong>Subgingival plaque samples from all subjects were collected for shotgun metagenomic sequencing and broad-target metabolomics analysis.</p><p><strong>Results: </strong>Forty pathogens, including <i>Porphyromonas gingivalis</i>, <i>Fusobacterium nucleatum</i>, <i>Eubacterium saphenum</i>, <i>Gemella morbillorum</i>, <i>Tannerella forsythia</i>, <i>Streptococcus anginosus</i> group, Selenomonas sputigena etc, were significantly enriched in pregnant patients with periodontitis (PPP). Conversely, symbiotic species such as <i>Morococcus cerebrosus</i>, <i>Streptococcus vestibularis</i>, <i>S.</i> <i>salivarius</i>, <i>S.</i> <i>mitis</i>, and <i>S.</i> <i>pneumoniae</i> were significantly more abundant in healthy controls (HCs). A total of 87 predicted functional modules (PFMs) exhibited significant differences between the two groups; eight PFMs showed high enrichment in PPP with involvement of PPP-enriched species within these pathways. The remaining 79 PFMs encompassing ribonucleotide biosynthesis, carbohydrate, and amino acid metabolism were highly abundant in HCs. For oral microbial metabolome, a total of 105 metabolites related to 150 KEGG pathways displayed significant differences between the two groups. Pathways such as pyruvate metabolism, folate biosynthesis, vascular smooth muscle contraction, and AMPK/mTOR signaling pathway along with their associated metabolites were found to be enriched in PPP, while carbohydrate metabolism predominated among HCs. Spearman's rank correlation analysis revealed significant positive associations between species enriched in PPP and metabolites enriched in PPP, but significant negative associations between species enriched in PPP and metabolites enriched in HCs.</p><p><strong>Discussion: </strong>Our findings provide potential biomarkers for distinguishing periodontitis during pregnancy while offering valuable insights into mechanisms exploration and clinical intervention.</p>\",\"PeriodicalId\":13577,\"journal\":{\"name\":\"Infection and Drug Resistance\",\"volume\":\"17 \",\"pages\":\"4665-4683\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-10-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11520917/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Infection and Drug Resistance\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.2147/IDR.S475164\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Infection and Drug Resistance","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.2147/IDR.S475164","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

摘要

引言我们的研究调查了患有和未患有牙周炎的怀孕患者口腔微生物群和代谢物之间的差异和相关性:方法:收集所有受试者的龈下牙菌斑样本,进行霰弹枪元基因组测序和广靶标代谢组学分析:结果:40 种病原体,包括牙龈卟啉单胞菌、核酸化脓性镰刀菌、无菌脓疱疮杆菌、摩尔比洛菌、连翘丹菌、龈沟链球菌群、硒单胞菌等,在妊娠牙周炎(PPP)患者中明显富集。相反,在健康对照组(HCs)中,共生物种(如摩洛哥脑膜炎球菌、前庭大腺炎链球菌、唾液腺链球菌、米氏链球菌和肺炎链球菌)的数量明显较多。共有 87 个预测功能模块(PFMs)在两组间表现出显著差异;其中 8 个功能模块在 PPP 中表现出高度富集,PPP 富集物种参与了这些通路。其余 79 个 PFMs 包括核糖核苷酸生物合成、碳水化合物和氨基酸代谢,在 HCs 中含量较高。在口腔微生物代谢组中,与 150 条 KEGG 通路相关的 105 种代谢物在两组之间存在显著差异。研究发现,丙酮酸代谢、叶酸生物合成、血管平滑肌收缩、AMPK/mTOR 信号通路等通路及其相关代谢物在 PPP 中富集,而在 HC 中则以碳水化合物代谢为主。斯皮尔曼等级相关分析表明,PPP 中富集的物种与 PPP 中富集的代谢物之间存在显著的正相关,但 PPP 中富集的物种与 HCs 中富集的代谢物之间存在显著的负相关:我们的研究结果为鉴别妊娠期牙周炎提供了潜在的生物标志物,同时也为机制探索和临床干预提供了有价值的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Multiomics Analysis Reveals Significant Disparities in the Oral Microbiota and Metabolites Between Pregnant Women with and without Periodontitis.

Introduction: Our study investigated the disparities and correlations between oral microbiota and metabolites in pregnant patients with and without periodontitis.

Methods: Subgingival plaque samples from all subjects were collected for shotgun metagenomic sequencing and broad-target metabolomics analysis.

Results: Forty pathogens, including Porphyromonas gingivalis, Fusobacterium nucleatum, Eubacterium saphenum, Gemella morbillorum, Tannerella forsythia, Streptococcus anginosus group, Selenomonas sputigena etc, were significantly enriched in pregnant patients with periodontitis (PPP). Conversely, symbiotic species such as Morococcus cerebrosus, Streptococcus vestibularis, S. salivarius, S. mitis, and S. pneumoniae were significantly more abundant in healthy controls (HCs). A total of 87 predicted functional modules (PFMs) exhibited significant differences between the two groups; eight PFMs showed high enrichment in PPP with involvement of PPP-enriched species within these pathways. The remaining 79 PFMs encompassing ribonucleotide biosynthesis, carbohydrate, and amino acid metabolism were highly abundant in HCs. For oral microbial metabolome, a total of 105 metabolites related to 150 KEGG pathways displayed significant differences between the two groups. Pathways such as pyruvate metabolism, folate biosynthesis, vascular smooth muscle contraction, and AMPK/mTOR signaling pathway along with their associated metabolites were found to be enriched in PPP, while carbohydrate metabolism predominated among HCs. Spearman's rank correlation analysis revealed significant positive associations between species enriched in PPP and metabolites enriched in PPP, but significant negative associations between species enriched in PPP and metabolites enriched in HCs.

Discussion: Our findings provide potential biomarkers for distinguishing periodontitis during pregnancy while offering valuable insights into mechanisms exploration and clinical intervention.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Infection and Drug Resistance
Infection and Drug Resistance Medicine-Pharmacology (medical)
CiteScore
5.60
自引率
7.70%
发文量
826
审稿时长
16 weeks
期刊介绍: About Journal Editors Peer Reviewers Articles Article Publishing Charges Aims and Scope Call For Papers ISSN: 1178-6973 Editor-in-Chief: Professor Suresh Antony An international, peer-reviewed, open access journal that focuses on the optimal treatment of infection (bacterial, fungal and viral) and the development and institution of preventative strategies to minimize the development and spread of resistance.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信