PREPRINT 用于治疗癌症的纳米粒子细胞吸收模型敏感性分析的机器学习。

IF 2.2 4区 医学 Q3 ENGINEERING, BIOMEDICAL
Sarah Iaquinta, Shahram Khazaie, Samer Albanna, Sylvain Fréour, Frédéric Jacquemin
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引用次数: 0

摘要

纳米粒子(NPs)的细胞摄取实验研究对基于 NP 的给药系统的研究非常有用,但由于造成这种现象的参数众多,往往难以解释。因此,找出不重要的参数以减少用于实验设计的变量数量是非常有意义的。在这项工作中,使用了细胞膜包裹椭圆形 NP 的模型,以比较 NP 的长宽比、膜张力、NP-膜粘附力及其在与 NP 相互作用过程中的变化对包裹过程平衡状态的影响。我们建立并比较了克里金法、多项式混沌展开法(PCE)和人工神经网络(ANN)等几种代用模型,以模拟计算成本高昂的模型。只有基于人工神经网络的模型优于其他方法,能提供更好的预测性指标,因此可用于计算灵敏度指数。我们的结果表明,NP 的长宽比、NP 与膜的初始粘附力、膜张力以及受体动力学后 NP 与膜粘附力增加的延迟是 NP 细胞内化的主要因素,而其他参数的影响可以忽略不计。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PREPRINT Machine Learning for the Sensitivity Analysis of a Model of the Cellular Uptake of Nanoparticles for the Treatment of Cancer.

Experimental studies on the cellular uptake of nanoparticles (NPs), useful for the investigation of NP-based drug delivery systems, are often difficult to interpret due to the large number of parameters that can contribute to the phenomenon. It is therefore of great interest to identify insignificant parameters to reduce the number of variables used for the design of experiments. In this work, a model of the wrapping of elliptical NPs by the cell membrane is used to compare the influence of the aspect ratio of the NP, the membrane tension, the NP-membrane adhesion, and its variation during the interaction with the NP on the equilibrium state of the wrapping process. Several surrogate models, such as Kriging, Polynomial Chaos Expansion (PCE), and artificial neural networks (ANN) have been built and compared to emulate the computationally expensive model. Only the ANN-based model outperformed the other approaches by providing much better predictivity metrics and could therefore be used to compute the sensitivity indices. Our results showed that the NP's aspect ratio, the initial NP-membrane adhesion, the membrane tension, and the delay for the increase of the NP-membrane adhesion after receptor dynamics are the main contributors to the cellular internalization of the NP, while the influence of other parameters is negligible.

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来源期刊
International Journal for Numerical Methods in Biomedical Engineering
International Journal for Numerical Methods in Biomedical Engineering ENGINEERING, BIOMEDICAL-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
4.50
自引率
9.50%
发文量
103
审稿时长
3 months
期刊介绍: All differential equation based models for biomedical applications and their novel solutions (using either established numerical methods such as finite difference, finite element and finite volume methods or new numerical methods) are within the scope of this journal. Manuscripts with experimental and analytical themes are also welcome if a component of the paper deals with numerical methods. Special cases that may not involve differential equations such as image processing, meshing and artificial intelligence are within the scope. Any research that is broadly linked to the wellbeing of the human body, either directly or indirectly, is also within the scope of this journal.
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