希腊北部 COVID-19 大流行后艰难梭菌 PCR 核型 181 的流行病学。

IF 1.3 4区 医学 Q4 IMMUNOLOGY
Acta microbiologica et immunologica Hungarica Pub Date : 2024-10-28 Print Date: 2024-12-19 DOI:10.1556/030.2024.02401
Eliana Charisi, Katerina Tsioka, Theodoros Karampatakis, Melina Kachrimanidou
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引用次数: 0

摘要

艰难梭菌感染(CDI)是导致住院病人腹泻的最主要原因之一。本研究旨在调查希腊塞萨洛尼基一家康复中心的住院病人在 COVID-19 大流行后 CDI 的发病率和流行病学。该研究对所有年龄段(2023 年 1 月至 2023 年 12 月)确诊为腹泻的住院病人进行了回顾性观察队列研究,并对他们进行了 CDI 初步筛查。在所有已确诊的 CDI 患者中,根据其在整个研究期间的月隔离发病率随机抽取部分患者,以调查其流行病学数据和临床特征。CDI 的实验室诊断采用酶免疫测定法,然后进行特异性厌氧培养和分子检测,以检测致毒艰难梭菌。分离出的艰难梭菌菌株通过 PCR 核糖分型技术进一步鉴定。研究期间,艰难梭菌感染的年发病率为 27.1%(130/480)。CDI 发病率呈线性下降趋势,从 32.5% 降至 18.2%(P = 0.024)。全因死亡率为 5.0%(3/60)。住院时间与复发次数呈正相关(r = 0.546,P < 0.001),28 名患者(46.7%)出现感染复发。本研究发现了七种不同的 PCR 核型。以艰难梭菌 tcdA+, tcdB+, cdtA+, cdtB+ PCR 核型 181(RT181)为主(76.6%,46/60),其次是毒素 A 阴性 PCR RT017(11.6%,7/60)。COVID-19 大流行后,CDI 的年发病率有所下降。我们的研究表明,在希腊北部 COVID-19 大流行后,具有 tcdA+、ttcdB+、cttA+、cttB+ 毒素基因图谱的艰难梭菌 RT181 占主导地位。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Epidemiology of Clostridioides difficile PCR ribotype 181 after the COVID-19 pandemic in Northern Greece.

Clostridioides difficile infection (CDI) is one of the most significant causes of diarrhea in hospitalized patients. The aim of this study was to investigate the incidence and epidemiology of CDI after the COVID-19 pandemic in hospitalized patients in a rehabilitation center in Thessaloniki, Greece. Α retrospective observational cohort study was performed in inpatients diagnosed with diarrhea of all ages (January 2023 - December 2023) who were initially screened for CDI. From the total cohort of patients with proven CDI, some patients were randomly selected based on their monthly isolation incidence throughout the study period, to investigate their epidemiological data and clinical characteristics. Laboratory diagnosis of CDI was performed by enzyme immunoassay, followed by specific anaerobic culture and molecular testing for detection of toxigenic C. difficile. The isolated C. difficile strains were further characterized by PCR ribotyping. The annual incidence of CDI during the study period was 27.1% (130/480). The linear trend of CDI incidence decreased from 32.5% to 18.2% (P = 0.024). The all-cause mortality rate was 5.0% (3/60). A positive correlation was observed between the length of hospital stay and the number of recurrences (r = 0.546, P < 0.001), while 28 patients (46.7%) experienced recurrence of the infection. Seven different PCR ribotypes were identified in this study. C. difficile tcdA+, tcdB+, cdtA+, cdtB+ PCR ribotype 181 (RT181) was the predominant (76.6%, 46/60), followed by toxin A-negative PCR RT017 (11.6%, 7/60). The annual incidence of CDI decreased after the COVID-19 pandemic. Our study demonstrates predominance of C. difficile RT181 with tcdA+, tcdB+, cdtA+, cdtB+ toxin gene profile after COVID-19 pandemic in Northern Greece.

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来源期刊
CiteScore
2.30
自引率
13.30%
发文量
36
审稿时长
>12 weeks
期刊介绍: AMIH is devoted to the publication of research in all fields of medical microbiology (bacteriology, virology, parasitology, mycology); immunology of infectious diseases and study of the microbiome related to human diseases.
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