Ryan Ha, Ashley Heilmann, Sylvain A Lother, Christine Turenne, David Alexander, Yoav Keynan, Zulma Vanessa Rueda
{"title":"当前军团菌病诊断方法在捕捉临床相关军团菌流行病学方面的充分性:范围审查。","authors":"Ryan Ha, Ashley Heilmann, Sylvain A Lother, Christine Turenne, David Alexander, Yoav Keynan, Zulma Vanessa Rueda","doi":"10.3390/pathogens13100857","DOIUrl":null,"url":null,"abstract":"<p><p><i>Legionella</i> is an underdiagnosed and underreported etiology of pneumonia. <i>Legionella pneumophila</i> serogroup 1 (LpSG1) is thought to be the most common pathogenic subgroup. This assumption is based on the frequent use of a urinary antigen test (UAT), only capable of diagnosing LpSG1. We aimed to explore the frequency of <i>Legionella</i> infections in individuals diagnosed with pneumonia and the performance of diagnostic methods for detecting <i>Legionella</i> infections. We conducted a scoping review to answer the following questions: (1) \"Does nucleic acid testing (NAT) increase the detection of non-<i>pneumophila</i> serogroup 1 <i>Legionella</i> compared to non-NAT?\"; and (2) \"Does being immunocompromised increase the frequency of pneumonia caused by non-<i>pneumophila</i> serogroup 1 <i>Legionella</i> compared to non-immunocompromised individuals with Legionnaires' disease (LD)?\". Articles reporting various diagnostic methods (both NAT and non-NAT) for pneumonia were extracted from several databases. Of the 3449 articles obtained, 31 were included in our review. The most common species were found to be <i>L. pneumophila</i>, <i>L. longbeachae</i>, and unidentified <i>Legionella</i> species appearing in 1.4%, 0.9%, and 0.6% of pneumonia cases. Nearly 50% of cases were caused by unspecified species or serogroups not detected by the standard UAT. NAT-based techniques were more likely to detect <i>Legionella</i> than non-NAT-based techniques. The identification and detection of <i>Legionella</i> and serogroups other than serogroup 1 is hampered by a lack of application of broader pan-<i>Legionella</i> or pan-serogroup diagnostics.</p>","PeriodicalId":19758,"journal":{"name":"Pathogens","volume":null,"pages":null},"PeriodicalIF":3.3000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11510479/pdf/","citationCount":"0","resultStr":"{\"title\":\"The Adequacy of Current Legionnaires' Disease Diagnostic Practices in Capturing the Epidemiology of Clinically Relevant <i>Legionella</i>: A Scoping Review.\",\"authors\":\"Ryan Ha, Ashley Heilmann, Sylvain A Lother, Christine Turenne, David Alexander, Yoav Keynan, Zulma Vanessa Rueda\",\"doi\":\"10.3390/pathogens13100857\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Legionella</i> is an underdiagnosed and underreported etiology of pneumonia. <i>Legionella pneumophila</i> serogroup 1 (LpSG1) is thought to be the most common pathogenic subgroup. This assumption is based on the frequent use of a urinary antigen test (UAT), only capable of diagnosing LpSG1. We aimed to explore the frequency of <i>Legionella</i> infections in individuals diagnosed with pneumonia and the performance of diagnostic methods for detecting <i>Legionella</i> infections. We conducted a scoping review to answer the following questions: (1) \\\"Does nucleic acid testing (NAT) increase the detection of non-<i>pneumophila</i> serogroup 1 <i>Legionella</i> compared to non-NAT?\\\"; and (2) \\\"Does being immunocompromised increase the frequency of pneumonia caused by non-<i>pneumophila</i> serogroup 1 <i>Legionella</i> compared to non-immunocompromised individuals with Legionnaires' disease (LD)?\\\". Articles reporting various diagnostic methods (both NAT and non-NAT) for pneumonia were extracted from several databases. Of the 3449 articles obtained, 31 were included in our review. The most common species were found to be <i>L. pneumophila</i>, <i>L. longbeachae</i>, and unidentified <i>Legionella</i> species appearing in 1.4%, 0.9%, and 0.6% of pneumonia cases. Nearly 50% of cases were caused by unspecified species or serogroups not detected by the standard UAT. NAT-based techniques were more likely to detect <i>Legionella</i> than non-NAT-based techniques. The identification and detection of <i>Legionella</i> and serogroups other than serogroup 1 is hampered by a lack of application of broader pan-<i>Legionella</i> or pan-serogroup diagnostics.</p>\",\"PeriodicalId\":19758,\"journal\":{\"name\":\"Pathogens\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2024-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11510479/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Pathogens\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3390/pathogens13100857\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pathogens","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3390/pathogens13100857","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
The Adequacy of Current Legionnaires' Disease Diagnostic Practices in Capturing the Epidemiology of Clinically Relevant Legionella: A Scoping Review.
Legionella is an underdiagnosed and underreported etiology of pneumonia. Legionella pneumophila serogroup 1 (LpSG1) is thought to be the most common pathogenic subgroup. This assumption is based on the frequent use of a urinary antigen test (UAT), only capable of diagnosing LpSG1. We aimed to explore the frequency of Legionella infections in individuals diagnosed with pneumonia and the performance of diagnostic methods for detecting Legionella infections. We conducted a scoping review to answer the following questions: (1) "Does nucleic acid testing (NAT) increase the detection of non-pneumophila serogroup 1 Legionella compared to non-NAT?"; and (2) "Does being immunocompromised increase the frequency of pneumonia caused by non-pneumophila serogroup 1 Legionella compared to non-immunocompromised individuals with Legionnaires' disease (LD)?". Articles reporting various diagnostic methods (both NAT and non-NAT) for pneumonia were extracted from several databases. Of the 3449 articles obtained, 31 were included in our review. The most common species were found to be L. pneumophila, L. longbeachae, and unidentified Legionella species appearing in 1.4%, 0.9%, and 0.6% of pneumonia cases. Nearly 50% of cases were caused by unspecified species or serogroups not detected by the standard UAT. NAT-based techniques were more likely to detect Legionella than non-NAT-based techniques. The identification and detection of Legionella and serogroups other than serogroup 1 is hampered by a lack of application of broader pan-Legionella or pan-serogroup diagnostics.
期刊介绍:
Pathogens (ISSN 2076-0817) publishes reviews, regular research papers and short notes on all aspects of pathogens and pathogen-host interactions. There is no restriction on the length of the papers. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible. Full experimental and/or methodical details must be provided for research articles.