CellSAM:通过非对称大规模视觉模型特征蒸馏聚合网络推进病理图像细胞分离。

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Xiao Ma, Jin Huang, Mengping Long, Xiaoxiao Li, Zhaoyi Ye, Wanting Hu, Yaxiaer Yalikun, Du Wang, Taobo Hu, Liye Mei, Cheng Lei
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引用次数: 0

摘要

Segment anything model(SAM)作为一种有效的大规模图像分割模型,已经引起了广泛的兴趣,之前也有人将其应用于医学影像领域。然而,在计算病理学中,细胞核实例的精确分割仍然是一项艰巨的挑战,因为细胞核的形态变化很大,而且细胞核密集聚集,边界不清。本研究提出了一种名为 CellSAM 的创新细胞分割算法。CellSAM 有可能提高疾病识别和治疗计划的有效性和精确性。作为 SAM 的变体,CellSAM 集成了双图像编码器,并采用了知识提炼和掩膜融合等技术。这一创新模型在捕捉错综复杂的细胞结构和确保资源受限情况下的适应性方面表现出良好的能力。实验结果表明,这种结构能有效提高细胞分割的质量和精度。值得注意的是,CellSAM 即使在训练数据极少的情况下也能表现出出色的效果。在对特定细胞分割任务的评估中,广泛的比较分析表明 CellSAM 优于一般基本模型和最先进的(SOTA)特定任务模型。综合评估指标得出的平均准确率、召回率和精确率分别为 0.884、0.876 和 0.768。大量实验表明,CellSAM 在捕捉微妙细节和复杂结构方面表现出色,能够准确分割图像中的细胞。此外,CellSAM 在临床数据上也表现出色,这表明它在治疗计划和疾病诊断方面具有强大的应用潜力,从而进一步提高了计算机辅助医疗的效率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
CellSAM: Advancing Pathologic Image Cell Segmentation via Asymmetric Large-Scale Vision Model Feature Distillation Aggregation Network.

Segment anything model (SAM) has attracted extensive interest as a potent large-scale image segmentation model, with prior efforts adapting it for use in medical imaging. However, the precise segmentation of cell nucleus instances remains a formidable challenge in computational pathology, given substantial morphological variations and the dense clustering of nuclei with unclear boundaries. This study presents an innovative cell segmentation algorithm named CellSAM. CellSAM has the potential to improve the effectiveness and precision of disease identification and therapy planning. As a variant of SAM, CellSAM integrates dual-image encoders and employs techniques such as knowledge distillation and mask fusion. This innovative model exhibits promising capabilities in capturing intricate cell structures and ensuring adaptability in resource-constrained scenarios. The experimental results indicate that this structure effectively enhances the quality and precision of cell segmentation. Remarkably, CellSAM demonstrates outstanding results even with minimal training data. In the evaluation of particular cell segmentation tasks, extensive comparative analyzes show that CellSAM outperforms both general fundamental models and state-of-the-art (SOTA) task-specific models. Comprehensive evaluation metrics yield scores of 0.884, 0.876, and 0.768 for mean accuracy, recall, and precision respectively. Extensive experiments show that CellSAM excels in capturing subtle details and complex structures and is capable of segmenting cells in images accurately. Additionally, CellSAM demonstrates excellent performance on clinical data, indicating its potential for robust applications in treatment planning and disease diagnosis, thereby further improving the efficiency of computer-aided medicine.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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