Alina Ebert, Saleh Alseekh, Lucio D'Andrea, Ute Roessner, Ralph Bock, Joachim Kopka
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Many HGL-DTGs occur exclusively within the <i>Nicotiana</i> genus, but information from the molecular model species <i>N. tabacum</i>, <i>N. benthamiana</i>, and the tree tobacco <i>N. glauca</i> is limited.</p><p><strong>Objectives: </strong>We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.</p><p><strong>Methods: </strong>We analysed polar metabolite extracts in comparison to the previously investigated wild reference species <i>N. attenuata</i> using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.</p><p><strong>Results: </strong>We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in <i>N. tabacum</i>, <i>N. glauca</i>, and <i>N. benthamiana</i> to <i>N. attenuata</i>. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.</p><p><strong>Conclusions: </strong>We extend the number of known HGL-DTGs with a focus on <i>Nicotiana</i> model species and demonstrate that the HGL-DTG family of <i>N. tabacum</i> plants can be surprisingly complex. 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引用次数: 0
摘要
背景:茄属植物中含有大量专门的抗食草代谢物。这些代谢物包括庞大的 17-羟基香叶醇二萜糖苷(HGL-DTGs)家族。许多 HGL-DTGs 只出现在烟草属中,但来自分子模式物种 N. tabacum、N. benthamiana 和树烟草 N. glauca 的信息却很有限:我们研究了这些物种中 HGL-DTG 的出现和复杂性,旨在提供深入的参考注释和全面的 HGL-DTG 目录:我们使用正ESI(+)和负ESI(-)模式电喷雾离子化LC-MS和MS/MS分析了极性代谢物提取物,并与之前研究的野生参考物种N. attenuata进行了比较:结果:我们提供了 66 种 HGL-DTGs 的注释,并提供了部分 HGL-DTGs 的源内和 MS/MS 片段谱图,以及对 ESI(+) 和研究较少的 ESI(-) 谱图的示例性片段解释。我们将 HGL-DTGs 在 N. tabacum、N. glauca 和 N. benthamiana 与 N. attenuata 中的存在情况进行比较,总结出一条潜在的生物合成途径。约有三分之一的 HGL-DTGs 是色谱分析出的己糖、脱氧己糖或丙二酸共轭物的异构体。对于脱氧己糖分子数较少的共轭物,异构体的数量尤其多:我们以烟草模式物种为重点,扩展了已知 HGL-DTG 的数量,并证明烟草植物的 HGL-DTG 家族可能出奇地复杂。我们的研究提供了一个更好的基础,详细参考了以前对野生烟草物种的研究,并能推断出 HGL-DTG 途径,以及生物合成这一重要的专门防御代谢物家族所需的酶。
Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers.
Background: Specialised anti-herbivory metabolites are abundant in the solanaceous genus Nicotiana. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the Nicotiana genus, but information from the molecular model species N. tabacum, N. benthamiana, and the tree tobacco N. glauca is limited.
Objectives: We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.
Methods: We analysed polar metabolite extracts in comparison to the previously investigated wild reference species N. attenuata using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.
Results: We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in N. tabacum, N. glauca, and N. benthamiana to N. attenuata. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.
Conclusions: We extend the number of known HGL-DTGs with a focus on Nicotiana model species and demonstrate that the HGL-DTG family of N. tabacum plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild Nicotiana species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.
MetabolitesBiochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
5.70
自引率
7.30%
发文量
1070
审稿时长
17.17 days
期刊介绍:
Metabolites (ISSN 2218-1989) is an international, peer-reviewed open access journal of metabolism and metabolomics. Metabolites publishes original research articles and review articles in all molecular aspects of metabolism relevant to the fields of metabolomics, metabolic biochemistry, computational and systems biology, biotechnology and medicine, with a particular focus on the biological roles of metabolites and small molecule biomarkers. Metabolites encourages scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on article length. Sufficient experimental details must be provided to enable the results to be accurately reproduced. Electronic material representing additional figures, materials and methods explanation, or supporting results and evidence can be submitted with the main manuscript as supplementary material.