{"title":"利用机器学习算法预测无症状肾结石:法萨成人队列研究(FACS)的启示。","authors":"Fatemeh Mahmoodi, Aref Andishgar, Eisa Mahmoudi, Alireza Monsef, Sina Bazmi, Reza Tabrizi","doi":"10.1186/s13104-024-06979-2","DOIUrl":null,"url":null,"abstract":"<p><strong>Objectives: </strong>To enhance the identification of individuals at risk of developing clinically significant kidney stones.</p><p><strong>Methods: </strong>In this study, data from the Fasa Adults Cohort Study were analyzed to explore factors linked to symptomatic and clinically significant kidney stone disease. After cleaning, 10,128 participants with 103 variables were studied. One outcome variable (presence of symptomatic kidney stones) and 102 predictor variables from surveys and tests were assessed. Five Machine learning (ML) algorithms (SVM, RF, KNN, GBM, XGB) were applied to examine kidney stone factors, with performance comparisons made. Data balancing was done using SMOTE, and metrics like accuracy, precision, sensitivity, specificity, F1 score, and AUC were evaluated for each algorithm.</p><p><strong>Results: </strong>The XGB model outperformed others with AUC of 0.60, while RF, GBM, SVC, and KNN had AUC values of 0.58, 0.57, 0.54, and 0.52. RF, GBM, and XGB showed good accuracy at 0.81, 0.81, and 0.77. Top predictors for kidney stones were serum creatinine, salt intake, hospitalization history, sleep duration, and BUN levels.</p><p><strong>Conclusions: </strong>ML models show promise in evaluating an individual's risk of developing painful kidney stones and recommending early lifestyle changes to reduce this risk. Further research can enhance predictive accuracy and tailor interventions for better prevention/management.</p>","PeriodicalId":9234,"journal":{"name":"BMC Research Notes","volume":"17 1","pages":"318"},"PeriodicalIF":1.6000,"publicationDate":"2024-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11515596/pdf/","citationCount":"0","resultStr":"{\"title\":\"Predicting symptomatic kidney stones using machine learning algorithms: insights from the Fasa adults cohort study (FACS).\",\"authors\":\"Fatemeh Mahmoodi, Aref Andishgar, Eisa Mahmoudi, Alireza Monsef, Sina Bazmi, Reza Tabrizi\",\"doi\":\"10.1186/s13104-024-06979-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objectives: </strong>To enhance the identification of individuals at risk of developing clinically significant kidney stones.</p><p><strong>Methods: </strong>In this study, data from the Fasa Adults Cohort Study were analyzed to explore factors linked to symptomatic and clinically significant kidney stone disease. After cleaning, 10,128 participants with 103 variables were studied. One outcome variable (presence of symptomatic kidney stones) and 102 predictor variables from surveys and tests were assessed. Five Machine learning (ML) algorithms (SVM, RF, KNN, GBM, XGB) were applied to examine kidney stone factors, with performance comparisons made. Data balancing was done using SMOTE, and metrics like accuracy, precision, sensitivity, specificity, F1 score, and AUC were evaluated for each algorithm.</p><p><strong>Results: </strong>The XGB model outperformed others with AUC of 0.60, while RF, GBM, SVC, and KNN had AUC values of 0.58, 0.57, 0.54, and 0.52. RF, GBM, and XGB showed good accuracy at 0.81, 0.81, and 0.77. Top predictors for kidney stones were serum creatinine, salt intake, hospitalization history, sleep duration, and BUN levels.</p><p><strong>Conclusions: </strong>ML models show promise in evaluating an individual's risk of developing painful kidney stones and recommending early lifestyle changes to reduce this risk. Further research can enhance predictive accuracy and tailor interventions for better prevention/management.</p>\",\"PeriodicalId\":9234,\"journal\":{\"name\":\"BMC Research Notes\",\"volume\":\"17 1\",\"pages\":\"318\"},\"PeriodicalIF\":1.6000,\"publicationDate\":\"2024-10-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11515596/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"BMC Research Notes\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1186/s13104-024-06979-2\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"BMC Research Notes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s13104-024-06979-2","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
Predicting symptomatic kidney stones using machine learning algorithms: insights from the Fasa adults cohort study (FACS).
Objectives: To enhance the identification of individuals at risk of developing clinically significant kidney stones.
Methods: In this study, data from the Fasa Adults Cohort Study were analyzed to explore factors linked to symptomatic and clinically significant kidney stone disease. After cleaning, 10,128 participants with 103 variables were studied. One outcome variable (presence of symptomatic kidney stones) and 102 predictor variables from surveys and tests were assessed. Five Machine learning (ML) algorithms (SVM, RF, KNN, GBM, XGB) were applied to examine kidney stone factors, with performance comparisons made. Data balancing was done using SMOTE, and metrics like accuracy, precision, sensitivity, specificity, F1 score, and AUC were evaluated for each algorithm.
Results: The XGB model outperformed others with AUC of 0.60, while RF, GBM, SVC, and KNN had AUC values of 0.58, 0.57, 0.54, and 0.52. RF, GBM, and XGB showed good accuracy at 0.81, 0.81, and 0.77. Top predictors for kidney stones were serum creatinine, salt intake, hospitalization history, sleep duration, and BUN levels.
Conclusions: ML models show promise in evaluating an individual's risk of developing painful kidney stones and recommending early lifestyle changes to reduce this risk. Further research can enhance predictive accuracy and tailor interventions for better prevention/management.
BMC Research NotesBiochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)
CiteScore
3.60
自引率
0.00%
发文量
363
审稿时长
15 weeks
期刊介绍:
BMC Research Notes publishes scientifically valid research outputs that cannot be considered as full research or methodology articles. We support the research community across all scientific and clinical disciplines by providing an open access forum for sharing data and useful information; this includes, but is not limited to, updates to previous work, additions to established methods, short publications, null results, research proposals and data management plans.