具有同质和异质刚度的活性细丝的集体行为。

IF 3.1 2区 化学 Q3 CHEMISTRY, PHYSICAL
Chaonan Zhao, Ran Yan, Nanrong Zhao
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引用次数: 0

摘要

活性生物聚合物的集体动力学对细胞运动、胞内运输和分裂等许多生命过程至关重要。最近的实验揭示了各种活性丝迷人的自组织模式,但明确的参数控制策略仍是一个未决问题。此外,迄今为止的理论研究大多涉及具有均匀刚度的活性链,不足以描述沿主干具有不同刚度的更复杂聚合物类别。在此,我们利用朗格文动力学模拟,以比较的方式研究了具有均匀和异质刚度的活性链的集体行为。我们在活性和硬度参数空间绘制了详细的非平衡相图。我们展示了多种相态,包括熔融、团簇、螺旋、极性和涡旋。确定了形成大规模极性和涡旋的适当参数组合。此外,我们还发现,刚度异质性会极大地改变系统的相态。它对长程极性结构有明显的破坏作用,但有利于涡旋模式的稳定。有趣的是,我们在均相和异相系统中都揭示了一种新的极性-涡旋转变,这与局部排列机制密切相关。总之,我们对活性、硬度和异质性之间的相互作用如何影响活性丝系统的集体动力学有了新的认识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Collective behavior of active filaments with homogeneous and heterogeneous stiffness.

The collective dynamics of active biopolymers is crucial for many processes in life, such as cellular motility, intracellular transport, and division. Recent experiments revealed fascinating self-organized patterns of diverse active filaments, while an explicit parameter control strategy remains an open problem. Moreover, theoretical studies so far mostly dealt with active chains with uniform stiffness, which are inadequate in describing the more complicated class of polymers with varying stiffness along the backbone. Here, using Langevin dynamics simulations, we investigate the collective behavior of active chains with homogeneous and heterogeneous stiffness in a comparative manner. We map a detailed non-equilibrium phase diagram in activity and stiffness parameter space. A wide range of phase states, including melt, cluster, spiral, polar, and vortex, are demonstrated. The appropriate parameter combination for large-scale polar and vortex formation is identified. In addition, we find that stiffness heterogeneity can substantially modulate the phase behaviors of the system. It has an evident destructive effect on the long-ranged polar structure but benefits the stability of the vortex pattern. Intriguingly, we unravel a novel polar-vortex transition in both homogeneous and heterogeneous systems, which is closely related to the local alignment mechanism. Overall, we achieve new insights into how the interplay among activity, stiffness, and heterogeneity affects the collective dynamics of active filament systems.

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来源期刊
Journal of Chemical Physics
Journal of Chemical Physics 物理-物理:原子、分子和化学物理
CiteScore
7.40
自引率
15.90%
发文量
1615
审稿时长
2 months
期刊介绍: The Journal of Chemical Physics publishes quantitative and rigorous science of long-lasting value in methods and applications of chemical physics. The Journal also publishes brief Communications of significant new findings, Perspectives on the latest advances in the field, and Special Topic issues. The Journal focuses on innovative research in experimental and theoretical areas of chemical physics, including spectroscopy, dynamics, kinetics, statistical mechanics, and quantum mechanics. In addition, topical areas such as polymers, soft matter, materials, surfaces/interfaces, and systems of biological relevance are of increasing importance. Topical coverage includes: Theoretical Methods and Algorithms Advanced Experimental Techniques Atoms, Molecules, and Clusters Liquids, Glasses, and Crystals Surfaces, Interfaces, and Materials Polymers and Soft Matter Biological Molecules and Networks.
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