Marina Dantas Corradin , Alvaro Luis Lamas Cassago , Maria Auxiliadora Coelho de Lima , Viseldo Ribeiro de Oliveira , Christiane Mendes Cassimiro Ramires , Ricardo Elesbão Alves , Guilherme Julião Zocolo , Fernando Batista Da Costa
{"title":"利用 LC-MS 和多元统计分析比较 Spondias mombin 和 S. tuberosa 的植物化学成分及其多样性","authors":"Marina Dantas Corradin , Alvaro Luis Lamas Cassago , Maria Auxiliadora Coelho de Lima , Viseldo Ribeiro de Oliveira , Christiane Mendes Cassimiro Ramires , Ricardo Elesbão Alves , Guilherme Julião Zocolo , Fernando Batista Da Costa","doi":"10.1016/j.bse.2024.104912","DOIUrl":null,"url":null,"abstract":"<div><div>The species <em>Spondias mombin</em> and <em>Spondias tuberosa</em> are fruit plants from the family Anacardiaceae, and the fruits of these plants are popularly known as “cajá” and “umbu”, respectively, and are marketed as exotic fruits in Brazil. The promoted marketing of these species in the market is hampered by their genetic variability and a lack of knowledge of techniques for reproduction, harvesting, and conservation. Therefore, active germplasm banks (AGBs) were created by The Brazilian Agricultural Research Corporation (EMBRAPA) to conserve genetic resources and optimize the use of these species. One of the approaches to the selection of species is metabolomics studies. In this work, using liquid chromatography‒mass spectrometry-based metabolomics, multivariate statistical analysis was used to correlate the metabolomic profiles of the bark, branches, and leaves of <em>S. mombin</em> and <em>S. tuberosa</em>. Thus, the compounds that most influenced the observed groups were identified and indicated as chemical markers of these species. To carry out the dereplication of the metabolomic profiles, a library of chemical structures of the Anacardiaceae family was constructed, which enabled the identification of 40 compounds, 10 of which were at level 1 using the library and reference standards and 30 at level 2 using only the library. The results of the present study showed that the branches and bark contain gallic acid and citric acid as chemical markers, and their profiles are similar between species. In the case of the leaves of <em>S. mombin</em>, the anacardic acid C17:3 and quercetin derivatives were identified as chemical markers, while the leaves of <em>S. tuberosa</em> contained the anacardic acids C17:1, C17:2, and C13 as chemical markers. Meteorological factors had a greater influence on the metabolic profile of the leaves than did genetic variability. In the case of <em>S. mombin</em> leaves, flavonoids are inversely correlated with cloudiness and directly correlated with the temperature at the collection site.</div></div>","PeriodicalId":8799,"journal":{"name":"Biochemical Systematics and Ecology","volume":null,"pages":null},"PeriodicalIF":1.4000,"publicationDate":"2024-10-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Comparison and diversity of phytochemical profiles of Spondias mombin and S. tuberosa using LC-MS and multivariate statistical analysis\",\"authors\":\"Marina Dantas Corradin , Alvaro Luis Lamas Cassago , Maria Auxiliadora Coelho de Lima , Viseldo Ribeiro de Oliveira , Christiane Mendes Cassimiro Ramires , Ricardo Elesbão Alves , Guilherme Julião Zocolo , Fernando Batista Da Costa\",\"doi\":\"10.1016/j.bse.2024.104912\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The species <em>Spondias mombin</em> and <em>Spondias tuberosa</em> are fruit plants from the family Anacardiaceae, and the fruits of these plants are popularly known as “cajá” and “umbu”, respectively, and are marketed as exotic fruits in Brazil. The promoted marketing of these species in the market is hampered by their genetic variability and a lack of knowledge of techniques for reproduction, harvesting, and conservation. Therefore, active germplasm banks (AGBs) were created by The Brazilian Agricultural Research Corporation (EMBRAPA) to conserve genetic resources and optimize the use of these species. One of the approaches to the selection of species is metabolomics studies. In this work, using liquid chromatography‒mass spectrometry-based metabolomics, multivariate statistical analysis was used to correlate the metabolomic profiles of the bark, branches, and leaves of <em>S. mombin</em> and <em>S. tuberosa</em>. Thus, the compounds that most influenced the observed groups were identified and indicated as chemical markers of these species. To carry out the dereplication of the metabolomic profiles, a library of chemical structures of the Anacardiaceae family was constructed, which enabled the identification of 40 compounds, 10 of which were at level 1 using the library and reference standards and 30 at level 2 using only the library. The results of the present study showed that the branches and bark contain gallic acid and citric acid as chemical markers, and their profiles are similar between species. In the case of the leaves of <em>S. mombin</em>, the anacardic acid C17:3 and quercetin derivatives were identified as chemical markers, while the leaves of <em>S. tuberosa</em> contained the anacardic acids C17:1, C17:2, and C13 as chemical markers. Meteorological factors had a greater influence on the metabolic profile of the leaves than did genetic variability. In the case of <em>S. mombin</em> leaves, flavonoids are inversely correlated with cloudiness and directly correlated with the temperature at the collection site.</div></div>\",\"PeriodicalId\":8799,\"journal\":{\"name\":\"Biochemical Systematics and Ecology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.4000,\"publicationDate\":\"2024-10-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biochemical Systematics and Ecology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0305197824001303\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemical Systematics and Ecology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0305197824001303","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Comparison and diversity of phytochemical profiles of Spondias mombin and S. tuberosa using LC-MS and multivariate statistical analysis
The species Spondias mombin and Spondias tuberosa are fruit plants from the family Anacardiaceae, and the fruits of these plants are popularly known as “cajá” and “umbu”, respectively, and are marketed as exotic fruits in Brazil. The promoted marketing of these species in the market is hampered by their genetic variability and a lack of knowledge of techniques for reproduction, harvesting, and conservation. Therefore, active germplasm banks (AGBs) were created by The Brazilian Agricultural Research Corporation (EMBRAPA) to conserve genetic resources and optimize the use of these species. One of the approaches to the selection of species is metabolomics studies. In this work, using liquid chromatography‒mass spectrometry-based metabolomics, multivariate statistical analysis was used to correlate the metabolomic profiles of the bark, branches, and leaves of S. mombin and S. tuberosa. Thus, the compounds that most influenced the observed groups were identified and indicated as chemical markers of these species. To carry out the dereplication of the metabolomic profiles, a library of chemical structures of the Anacardiaceae family was constructed, which enabled the identification of 40 compounds, 10 of which were at level 1 using the library and reference standards and 30 at level 2 using only the library. The results of the present study showed that the branches and bark contain gallic acid and citric acid as chemical markers, and their profiles are similar between species. In the case of the leaves of S. mombin, the anacardic acid C17:3 and quercetin derivatives were identified as chemical markers, while the leaves of S. tuberosa contained the anacardic acids C17:1, C17:2, and C13 as chemical markers. Meteorological factors had a greater influence on the metabolic profile of the leaves than did genetic variability. In the case of S. mombin leaves, flavonoids are inversely correlated with cloudiness and directly correlated with the temperature at the collection site.
期刊介绍:
Biochemical Systematics and Ecology is devoted to the publication of original papers and reviews, both submitted and invited, in two subject areas: I) the application of biochemistry to problems relating to systematic biology of organisms (biochemical systematics); II) the role of biochemistry in interactions between organisms or between an organism and its environment (biochemical ecology).
In the Biochemical Systematics subject area, comparative studies of the distribution of (secondary) metabolites within a wider taxon (e.g. genus or family) are welcome. Comparative studies, encompassing multiple accessions of each of the taxa within their distribution are particularly encouraged. Welcome are also studies combining classical chemosystematic studies (such as comparative HPLC-MS or GC-MS investigations) with (macro-) molecular phylogenetic studies. Studies that involve the comparative use of compounds to help differentiate among species such as adulterants or substitutes that illustrate the applied use of chemosystematics are welcome. In contrast, studies solely employing macromolecular phylogenetic techniques (gene sequences, RAPD studies etc.) will be considered out of scope. Discouraged are manuscripts that report known or new compounds from a single source taxon without addressing a systematic hypothesis. Also considered out of scope are studies using outdated and hard to reproduce macromolecular techniques such as RAPDs in combination with standard chemosystematic techniques such as GC-FID and GC-MS.