败血症中与二硫化硫相关基因的分类和功能分析

IF 5.3
Simeng He, Xiangxin Zhang, Zichen Wang, Qingju Zhang, Yu Yao, Jiaojiao Pang, Yuguo Chen
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引用次数: 0

摘要

败血症是一种危重病症,其特点是对感染的炎症反应导致多器官功能障碍。二硫化血症是一种新发现的程序性细胞死亡类型,与葡萄糖饥饿和二硫化物应激导致的肌动蛋白细胞骨架崩溃密切相关,但其在脓毒症中的作用在很大程度上还不为人所知。这项研究的目的是根据 GEO 数据库中脓毒症患者与健康人之间的差异表达基因(DEGs),为脓毒症伴有二硫化血症建立诊断和预后特征。我们首先确定了与脓毒症相关的二硫化硫枢纽基因,然后建立了共识聚类和免疫浸润特征。接着,我们利用LASSO和随机森林算法评估了与二硫化硫相关的风险基因,并通过提名图构建了脓毒症诊断模型。最后,基于二硫化血症相关 DEGs 的免疫浸润、GSVA 分析和 mRNA-miRNA 网络进行了筛选。筛选出5个上调的二硫化相关基因和7个下调的基因。其中,LRPPRC、SLC7A11、GLUT、MYH9、NUBPL 和 GYS1 等 6 个与二硫化相关的交叉基因对败血症具有较高的预测能力,准确率高达 99.7%。此外,关键基因的表达模式也得到了验证。该研究提供了一个基于二硫化血症特征的全面视角,以预测败血症的预后、生物学特征和潜在的治疗方向。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Classification and functional analysis of disulfidptosis-associated genes in sepsis

Classification and functional analysis of disulfidptosis-associated genes in sepsis

Sepsis represents a critical condition characterized by multiple-organ dysfunction resulting from inflammatory response to infection. Disulfidptosis is a newly identified type of programmed cell death that is intimately associated with the actin cytoskeleton collapse caused by glucose starvation and disulfide stress, but its role in sepsis is largely unknown. The study was to adopt a diagnostic and prognostic signature for sepsis with disulfidptosis based on the differentially expressed genes (DEGs) between sepsis and healthy people from GEO database. The disulfidptosis hub genes associated with sepsis were identified, and then developed consensus clustering and immune infiltration characteristics. Next, we evaluated disulfidptosis-related risk genes by using LASSO and Random Forest algorithms, and constructed the diagnostic sepsis model by nomogram. Finally, immune infiltration, GSVA analysis and mRNA-miRNA networks based on disulfidptosis-related DEGs were screened. There are five upregulated disulfidptosis-related genes and seven downregulated genes were filtered out. The six intersection disulfidptosis-related genes including LRPPRC, SLC7A11, GLUT, MYH9, NUBPL and GYS1 exhibited higher predictive ability for sepsis with an accuracy of 99.7%. In addition, the expression patterns of the critical genes were validated. The study provided a comprehensive view of disulfidptosis-based signatures to predict the prognosis, biological features and potential treatment directions for sepsis.

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来源期刊
CiteScore
11.50
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期刊介绍: The Journal of Cellular and Molecular Medicine serves as a bridge between physiology and cellular medicine, as well as molecular biology and molecular therapeutics. With a 20-year history, the journal adopts an interdisciplinary approach to showcase innovative discoveries. It publishes research aimed at advancing the collective understanding of the cellular and molecular mechanisms underlying diseases. The journal emphasizes translational studies that translate this knowledge into therapeutic strategies. Being fully open access, the journal is accessible to all readers.
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