Aimin Ma, Juncong Sun, Laibao Feng, Zheyong Xue, Wenbin Wu, Bo Song, Xingchen Xiong, Xiaoning Wang, Bin Han, Anne Osbourn, Xiaoquan Qi
{"title":"禾本科植物中氧代喹啉环化酶的功能多样性","authors":"Aimin Ma, Juncong Sun, Laibao Feng, Zheyong Xue, Wenbin Wu, Bo Song, Xingchen Xiong, Xiaoning Wang, Bin Han, Anne Osbourn, Xiaoquan Qi","doi":"10.1111/nph.20175","DOIUrl":null,"url":null,"abstract":"Summary<jats:list list-type=\"bullet\"> <jats:list-item>Triterpene skeletons, catalyzing by 2,3‐oxidosqualene cyclases (OSCs), are essential for synthesis of steroids and triterpenoids. In <jats:italic>japonica</jats:italic> rice cultivars Zhonghua11, a total of 12 <jats:italic>OsOSCs</jats:italic> have been found. While the catalytic functions of OsOSC1, 3, 4, 9, and 10 remain unclear, the functions of the other OsOSCs have been well studied.</jats:list-item> <jats:list-item>In this study, we conducted a comprehensive analysis of 12 OSC genes within genus <jats:italic>Oryza</jats:italic> with the aid of 63 genomes from cultivated and wild rice. We found that OSC genes are relatively conserved within genus <jats:italic>Oryza</jats:italic> with a few exceptions. Collinearity analysis further suggested that, throughout the evolutionary history of genus <jats:italic>Oryza</jats:italic>, the OSC genes have not undergone significant rearrangements or losses.</jats:list-item> <jats:list-item>Further functional analysis of 5 uncharacterized <jats:italic>OSCs</jats:italic> revealed that OsOSC10 was a friedelin synthase, which affected the development of rice grains. Additionally, the reconstructed ancestral sequences of <jats:italic>Oryza</jats:italic> OSC3 and <jats:italic>Oryza</jats:italic> OSC9 had lupeol synthase and poaceatapetol synthase activity, respectively.</jats:list-item> <jats:list-item>The discovery of friedelin synthase in rice unlocks a new catalytic path and biological function of <jats:italic>OsOSC10</jats:italic>. The pan‐genome analysis of <jats:italic>OSCs</jats:italic> within genus <jats:italic>Oryza</jats:italic> gives insights into the evolutionary trajectory and products diversity of <jats:italic>Oryza OSCs</jats:italic>.</jats:list-item> </jats:list>","PeriodicalId":214,"journal":{"name":"New Phytologist","volume":"110 1","pages":""},"PeriodicalIF":8.3000,"publicationDate":"2024-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Functional diversity of oxidosqualene cyclases in genus Oryza\",\"authors\":\"Aimin Ma, Juncong Sun, Laibao Feng, Zheyong Xue, Wenbin Wu, Bo Song, Xingchen Xiong, Xiaoning Wang, Bin Han, Anne Osbourn, Xiaoquan Qi\",\"doi\":\"10.1111/nph.20175\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Summary<jats:list list-type=\\\"bullet\\\"> <jats:list-item>Triterpene skeletons, catalyzing by 2,3‐oxidosqualene cyclases (OSCs), are essential for synthesis of steroids and triterpenoids. In <jats:italic>japonica</jats:italic> rice cultivars Zhonghua11, a total of 12 <jats:italic>OsOSCs</jats:italic> have been found. While the catalytic functions of OsOSC1, 3, 4, 9, and 10 remain unclear, the functions of the other OsOSCs have been well studied.</jats:list-item> <jats:list-item>In this study, we conducted a comprehensive analysis of 12 OSC genes within genus <jats:italic>Oryza</jats:italic> with the aid of 63 genomes from cultivated and wild rice. We found that OSC genes are relatively conserved within genus <jats:italic>Oryza</jats:italic> with a few exceptions. Collinearity analysis further suggested that, throughout the evolutionary history of genus <jats:italic>Oryza</jats:italic>, the OSC genes have not undergone significant rearrangements or losses.</jats:list-item> <jats:list-item>Further functional analysis of 5 uncharacterized <jats:italic>OSCs</jats:italic> revealed that OsOSC10 was a friedelin synthase, which affected the development of rice grains. Additionally, the reconstructed ancestral sequences of <jats:italic>Oryza</jats:italic> OSC3 and <jats:italic>Oryza</jats:italic> OSC9 had lupeol synthase and poaceatapetol synthase activity, respectively.</jats:list-item> <jats:list-item>The discovery of friedelin synthase in rice unlocks a new catalytic path and biological function of <jats:italic>OsOSC10</jats:italic>. The pan‐genome analysis of <jats:italic>OSCs</jats:italic> within genus <jats:italic>Oryza</jats:italic> gives insights into the evolutionary trajectory and products diversity of <jats:italic>Oryza OSCs</jats:italic>.</jats:list-item> </jats:list>\",\"PeriodicalId\":214,\"journal\":{\"name\":\"New Phytologist\",\"volume\":\"110 1\",\"pages\":\"\"},\"PeriodicalIF\":8.3000,\"publicationDate\":\"2024-10-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"New Phytologist\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1111/nph.20175\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"New Phytologist","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1111/nph.20175","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Functional diversity of oxidosqualene cyclases in genus Oryza
SummaryTriterpene skeletons, catalyzing by 2,3‐oxidosqualene cyclases (OSCs), are essential for synthesis of steroids and triterpenoids. In japonica rice cultivars Zhonghua11, a total of 12 OsOSCs have been found. While the catalytic functions of OsOSC1, 3, 4, 9, and 10 remain unclear, the functions of the other OsOSCs have been well studied.In this study, we conducted a comprehensive analysis of 12 OSC genes within genus Oryza with the aid of 63 genomes from cultivated and wild rice. We found that OSC genes are relatively conserved within genus Oryza with a few exceptions. Collinearity analysis further suggested that, throughout the evolutionary history of genus Oryza, the OSC genes have not undergone significant rearrangements or losses.Further functional analysis of 5 uncharacterized OSCs revealed that OsOSC10 was a friedelin synthase, which affected the development of rice grains. Additionally, the reconstructed ancestral sequences of Oryza OSC3 and Oryza OSC9 had lupeol synthase and poaceatapetol synthase activity, respectively.The discovery of friedelin synthase in rice unlocks a new catalytic path and biological function of OsOSC10. The pan‐genome analysis of OSCs within genus Oryza gives insights into the evolutionary trajectory and products diversity of Oryza OSCs.
期刊介绍:
New Phytologist is an international electronic journal published 24 times a year. It is owned by the New Phytologist Foundation, a non-profit-making charitable organization dedicated to promoting plant science. The journal publishes excellent, novel, rigorous, and timely research and scholarship in plant science and its applications. The articles cover topics in five sections: Physiology & Development, Environment, Interaction, Evolution, and Transformative Plant Biotechnology. These sections encompass intracellular processes, global environmental change, and encourage cross-disciplinary approaches. The journal recognizes the use of techniques from molecular and cell biology, functional genomics, modeling, and system-based approaches in plant science. Abstracting and Indexing Information for New Phytologist includes Academic Search, AgBiotech News & Information, Agroforestry Abstracts, Biochemistry & Biophysics Citation Index, Botanical Pesticides, CAB Abstracts®, Environment Index, Global Health, and Plant Breeding Abstracts, and others.