对 FCoV-23 可能向人类传播的风险进行硅学评估

IF 3.5 2区 农林科学 Q2 INFECTIOUS DISEASES
Ahmet Caglar Ozketen, Hasan Huseyin Kazan, Cenk Serhan Özverel, Tamer Şanlıdağ
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引用次数: 0

摘要

自 2019 年冠状病毒(CoV)大流行以来,冠状病毒一直是公共卫生负担的一个重大问题。尽管人类与野生动物之间的互动受到限制,但 CoVs 可感染包括家畜和家禽在内的所有动物,这表明未来可能会出现大流行。此外,CoV 通过变异进行种间传播的能力使其不仅对人类而且对动物健康都具有极大的风险。最近,塞浦路斯爆发了新的猫科动物 CoV 疫情,即所谓的 FCoV-23。除了对动物健康的担忧外,任何可能传播给人类的病毒现在都备受争议。然而,关于 FCoV-23 的特征研究却很有限。因此,我们的目的是利用硅学预测工具来评估 FCoV-23 是否可能传播给人类。因此,我们首先检测了 FCoV-23 的受体结合域(RBD)与猫靶蛋白及其人类同源蛋白的结合亲和力。接着,我们在 RBD 序列上随机并合理地创建了突变,并使用蛋白质对接工具评估了其结合亲和力。我们的研究结果表明,要增加与人类靶蛋白的结合亲和力,需要同时发生多个突变,这表明如果考虑到突变率,传染给人类的概率极低。不过,要全面总结可能的传播风险,还需要进一步的分子研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

In Silico Assessment for Risk of Possible Human Transmission of FCoV-23

In Silico Assessment for Risk of Possible Human Transmission of FCoV-23

Since the pandemic in 2019, coronaviruses (CoVs) have been a great concern for public health burden. The fact that CoVs can infect all animals including domestic ones and livestock points to a future pandemic even though interaction between human and wildlife animals is restricted. Moreover, interspecies transmission abilities of CoVs by mutations make them drastically risky not only for humans but also for animal health. Recently, a new CoV outbreak in cats in Cyprus, the so-called FCoV-23, has been realized. In addition to worries over animal health, any possible transmission to humans is now controversial. However, there have been limited characterization studies on FCoV-23. Thus, we aimed to assess the possible transmission of FCoV-23 to humans using in silico prediction tools. Accordingly, we first checked the binding affinities of receptor binding domain (RBD) of FCoV-23 against feline target protein and its human homolog. Next, we randomly and rationally created mutations on the RBD sequence and evaluated the binding affinities using protein docking tools. Our results underlined that multiple mutations at the same time were needed for increased binding affinity towards human target protein, demonstrating that the probability of transmission to humans was extremely low when mutation rates were regarded. Still, further molecular studies are required to comprehensively conclude the possible transmission risk.

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来源期刊
Transboundary and Emerging Diseases
Transboundary and Emerging Diseases 农林科学-传染病学
CiteScore
8.90
自引率
9.30%
发文量
350
审稿时长
1 months
期刊介绍: Transboundary and Emerging Diseases brings together in one place the latest research on infectious diseases considered to hold the greatest economic threat to animals and humans worldwide. The journal provides a venue for global research on their diagnosis, prevention and management, and for papers on public health, pathogenesis, epidemiology, statistical modeling, diagnostics, biosecurity issues, genomics, vaccine development and rapid communication of new outbreaks. Papers should include timely research approaches using state-of-the-art technologies. The editors encourage papers adopting a science-based approach on socio-economic and environmental factors influencing the management of the bio-security threat posed by these diseases, including risk analysis and disease spread modeling. Preference will be given to communications focusing on novel science-based approaches to controlling transboundary and emerging diseases. The following topics are generally considered out-of-scope, but decisions are made on a case-by-case basis (for example, studies on cryptic wildlife populations, and those on potential species extinctions): Pathogen discovery: a common pathogen newly recognised in a specific country, or a new pathogen or genetic sequence for which there is little context about — or insights regarding — its emergence or spread. Prevalence estimation surveys and risk factor studies based on survey (rather than longitudinal) methodology, except when such studies are unique. Surveys of knowledge, attitudes and practices are within scope. Diagnostic test development if not accompanied by robust sensitivity and specificity estimation from field studies. Studies focused only on laboratory methods in which relevance to disease emergence and spread is not obvious or can not be inferred (“pure research” type studies). Narrative literature reviews which do not generate new knowledge. Systematic and scoping reviews, and meta-analyses are within scope.
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