利用 Olink 蛋白质组学平台进行靶向蛋白质组学分析,发现青光眼的生物标记物

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Hui-Ying Zhang, Qing Liu, Feng-Sheng Wang, Wan Mu, Yue Zhu, Qiu-Yang Zhang, Si-Guo Feng, Jin Yao* and Biao Yan*, 
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引用次数: 0

摘要

代谢功能障碍在青光眼的发病机制中起着至关重要的作用。在这项研究中,我们利用 Olink 蛋白质组学分析来确定青光眼的潜在生物标志物。我们分别从 44 名白内障患者和 44 名青光眼患者的眼房水样本中提取了蛋白质。我们在青光眼组和白内障组之间发现了 84 个表达不同的代谢蛋白。基因本体富集分析显示,这些蛋白质参与了ER相关降解途径、白细胞介素-13生成调控和DNA损伤应答途径。京都基因和基因组百科全书(KEGG)的通路分析进一步揭示了与酪氨酸和嘧啶代谢等通路的联系。其中,ALDH1A1 成为对青光眼具有重要诊断潜力的候选基因。ALDH1A1 在蛋白-蛋白相互作用网络中也发挥了重要作用。在临床样本和缺血再灌注模型中都证实了青光眼患者房水中 ALDH1A1 水平的升高。功能测试证实,ALDH1A1 的升高会诱导体外视网膜神经节细胞(RGC)凋亡,并证明了它在体内 RGC 中的促凋亡作用。总之,这些发现不仅强调了ALDH1A1在青光眼中的重要作用,而且为临床决策和治疗策略提供了宝贵的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Targeted Proteomics Profiling for Biomarker Discovery in Glaucoma Using the Olink Proteomics Platform

Targeted Proteomics Profiling for Biomarker Discovery in Glaucoma Using the Olink Proteomics Platform

Metabolic dysfunction plays a crucial role in the pathogenesis of glaucoma. In this study, we used Olink proteomics profiling to identify potential biomarkers for glaucoma. Aqueous humor samples were obtained from 44 cataract patients and 44 glaucoma patients. We identified 84 differentially expressed metabolic proteins between the glaucoma and the cataract group. Gene Ontology enrichment analysis highlighted the involvement of these proteins in ER-associated degradation pathway, regulation of interleukin-13 production, and DNA damage response pathway. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis further revealed links to pathways, such as tyrosine and pyrimidine metabolism. Among these, ALDH1A1 emerged as a candidate with a significant diagnostic potential for glaucoma. ALDH1A1 also exhibited a prominent role in the protein–protein interaction network. Elevated levels of ALDH1A1 in the aqueous humor of glaucoma patients were confirmed both in clinical samples and in an ischemia/reperfusion model. Functional assays confirmed that elevated ALDH1A1 induced retinal ganglion cell (RGC) apoptosis in vitro and demonstrated its pro-apoptotic role in RGCs in vivo. Collectively, these findings not only underscore the significance of ALDH1A1 in glaucoma but also provide valuable insights into clinical decision-making and therapeutic strategies.

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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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