根据机器学习预测,成功将已批准的药物重新用于防治利什曼病。

IF 4.6 2区 医学 Q2 IMMUNOLOGY
Frontiers in Cellular and Infection Microbiology Pub Date : 2024-09-26 eCollection Date: 2024-01-01 DOI:10.3389/fcimb.2024.1403589
Rafeh Oualha, Yosser Zina Abdelkrim, Ikram Guizani, Emna Harigua-Souiai
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引用次数: 0

摘要

药物再利用是发现治疗利什曼病等被忽视热带病的新型疗法的一种很有前途的方法,它具有降低成本和缩短药物发现过程的优势。在之前的工作中,我们小组开发了一个机器学习管道,用于对美国食品及药物管理局批准的利什曼病寄生虫药物进行再利用。本研究的重点是通过评估 10 种候选药物的抗利什曼病效果,对这一方法进行体外验证。首先,我们使用 MTT 试验评估了这些药物对两株幼年利什曼原虫和一株主要利什曼原虫的活性,这两株原虫会引起不同的临床表现。标准抗利什曼原虫药物两性霉素 B 被用作阳性对照。有五种分子显示出抗利什曼病的作用,其中醋丁洛尔、普利洛卡因和苯肾上腺素在本文中首次被描述。在对原原体生长进行测试时,Acebutolol 显示的 IC50 值介于 69.28 至 145.53 µg/mL 之间。普鲁卡因的 IC50 值介于 33.10 至 45.81 微克/毫升之间。而苯肾上腺素的 IC50 值则大于 200 微克/毫升。其余两种药物迪布卡因和多潘立酮的 IC50 值明显较低,分别介于 0.58 至 1.05 微克/毫升和 6.30 至 8.17 微克/毫升之间。这两种化合物以前都被描述为体内抗利什曼原虫药物。在 IC50 浓度下,所有五种化合物对 THP-1 衍生巨噬细胞都没有明显的细胞毒性作用,因此可以对细胞内形式的主要利什曼原虫和幼年利什曼原虫寄生虫进行测试。有趣的是,与相应的原鞭毛虫相比,所有化合物对非原鞭毛虫都具有更强的 IC50 值,表现出抗利什曼病活性。值得注意的是,地布卡因和多潘立酮的 IC50 值最多为 1.99 微克/毫升。醋丁洛尔、普利洛卡因和苯肾上腺素的 IC50 值介于 13.84 至 66.81 微克/毫升之间。我们之前发布的美国食品及药物管理局批准的抗利什曼病药物的计算机辅助重新定位管道确定了迪布卡因和多潘立酮为候选药物,以支持之前的体内研究。本研究通过对非洲和中东地区高发的两种利什曼原虫进行体外验证,巩固了这些发现,并发现了醋丁洛尔、普利洛卡因和苯肾上腺素作为新型抗利什曼原虫效应物,从而证实了我们的方法的相关性,并呼吁开展进一步研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Approved drugs successfully repurposed against Leishmania based on machine learning predictions.

Drug repurposing is a promising approach towards the discovery of novel treatments against Neglected Tropical Diseases, such as Leishmaniases, presenting the advantage of reducing both costs and duration of the drug discovery process. In previous work, our group developed a Machine Learning pipeline for the repurposing of FDA-approved drugs against Leishmania parasites. The present study is focused on an in vitro validation of this approach by assessing the antileishmanial effects of 10 predicted drug candidates. First, we evaluated the drugs' activity against promastigotes from two strains of L. infantum and one of L. major, which caused distinct clinical manifestations, using an MTT assay. The standard anti-Leishmania drug Amphotericin B was used as a positive control. Five molecules demonstrated anti-Leishmania effects, out of which Acebutolol, Prilocaine and Phenylephrine are described herein for the first time. When tested on promastigote growth, Acebutolol displayed IC50 values ranging from 69.28 to 145.53 µg/mL. Prilocaine exhibited IC50 values between 33.10 and 45.81 µg/mL. Phenylephrine, on the other hand, presented IC50 values >200 µg/mL. The two remaining drugs, Dibucaine and Domperidone, exhibited significantly low IC50 values varying between 0.58 and 1.05 µg/mL, and 6.30 and 8.17 µg/mL, respectively. Both compounds were previously described as anti-Leishmania agents in vivo. All five compounds demonstrated no notable cytotoxic effects on THP-1-derived macrophages at the IC50 concentrations, allowing for their testing on the intracellular form of L. major and L. infantum parasites. Interestingly, all compounds exhibited antileishmanial activity on amastigotes with enhanced IC50 values compared to the corresponding promastigotes. Noticeably, Dibucaine and Domperidone displayed IC50 values of at most 1.99 µg/mL. Acebutolol, Prilocaine and Phenylephrine showed IC50 values ranging from 13.84 to 66.81 µg/mL. Our previously published Computer-Aided repositioning pipelines of FDA-approved drugs as antileishmanial agents identified Dibucaine and Domperidone as candidates in support of previous in vivo studies. This study consolidates such findings through the in vitro validation against 2 Leishmania species, highly prevalent in Africa and Middle East, and reveals Acebutolol, Prilocaine, and Phenylephrine as novel anti-Leishmania effectors, confirming the relevance of our approach and calling for further investigations.

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来源期刊
CiteScore
7.90
自引率
7.00%
发文量
1817
审稿时长
14 weeks
期刊介绍: Frontiers in Cellular and Infection Microbiology is a leading specialty journal, publishing rigorously peer-reviewed research across all pathogenic microorganisms and their interaction with their hosts. Chief Editor Yousef Abu Kwaik, University of Louisville is supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide. Frontiers in Cellular and Infection Microbiology includes research on bacteria, fungi, parasites, viruses, endosymbionts, prions and all microbial pathogens as well as the microbiota and its effect on health and disease in various hosts. The research approaches include molecular microbiology, cellular microbiology, gene regulation, proteomics, signal transduction, pathogenic evolution, genomics, structural biology, and virulence factors as well as model hosts. Areas of research to counteract infectious agents by the host include the host innate and adaptive immune responses as well as metabolic restrictions to various pathogenic microorganisms, vaccine design and development against various pathogenic microorganisms, and the mechanisms of antibiotic resistance and its countermeasures.
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