{"title":"根据机器学习预测,成功将已批准的药物重新用于防治利什曼病。","authors":"Rafeh Oualha, Yosser Zina Abdelkrim, Ikram Guizani, Emna Harigua-Souiai","doi":"10.3389/fcimb.2024.1403589","DOIUrl":null,"url":null,"abstract":"<p><p>Drug repurposing is a promising approach towards the discovery of novel treatments against Neglected Tropical Diseases, such as Leishmaniases, presenting the advantage of reducing both costs and duration of the drug discovery process. In previous work, our group developed a Machine Learning pipeline for the repurposing of FDA-approved drugs against <i>Leishmania</i> parasites. The present study is focused on an <i>in vitro</i> validation of this approach by assessing the antileishmanial effects of 10 predicted drug candidates. First, we evaluated the drugs' activity against promastigotes from two strains of <i>L. infantum</i> and one of <i>L. major</i>, which caused distinct clinical manifestations, using an MTT assay. The standard anti-<i>Leishmania</i> drug Amphotericin B was used as a positive control. Five molecules demonstrated anti-<i>Leishmania</i> effects, out of which Acebutolol, Prilocaine and Phenylephrine are described herein for the first time. When tested on promastigote growth, Acebutolol displayed IC<sub>50</sub> values ranging from 69.28 to 145.53 µg/mL. Prilocaine exhibited IC<sub>50</sub> values between 33.10 and 45.81 µg/mL. Phenylephrine, on the other hand, presented IC<sub>50</sub> values >200 µg/mL. The two remaining drugs, Dibucaine and Domperidone, exhibited significantly low IC<sub>50</sub> values varying between 0.58 and 1.05 µg/mL, and 6.30 and 8.17 µg/mL, respectively. Both compounds were previously described as anti-<i>Leishmania</i> agents <i>in vivo</i>. All five compounds demonstrated no notable cytotoxic effects on THP-1-derived macrophages at the IC<sub>50</sub> concentrations, allowing for their testing on the intracellular form of <i>L. major</i> and <i>L. infantum</i> parasites. Interestingly, all compounds exhibited antileishmanial activity on amastigotes with enhanced IC<sub>50</sub> values compared to the corresponding promastigotes. Noticeably, Dibucaine and Domperidone displayed IC<sub>50</sub> values of at most 1.99 µg/mL. Acebutolol, Prilocaine and Phenylephrine showed IC<sub>50</sub> values ranging from 13.84 to 66.81 µg/mL. Our previously published Computer-Aided repositioning pipelines of FDA-approved drugs as antileishmanial agents identified Dibucaine and Domperidone as candidates in support of previous <i>in vivo</i> studies. This study consolidates such findings through the <i>in vitro</i> validation against 2 <i>Leishmania</i> species, highly prevalent in Africa and Middle East, and reveals Acebutolol, Prilocaine, and Phenylephrine as novel anti-<i>Leishmania</i> effectors, confirming the relevance of our approach and calling for further investigations.</p>","PeriodicalId":12458,"journal":{"name":"Frontiers in Cellular and Infection Microbiology","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464777/pdf/","citationCount":"0","resultStr":"{\"title\":\"Approved drugs successfully repurposed against <i>Leishmania</i> based on machine learning predictions.\",\"authors\":\"Rafeh Oualha, Yosser Zina Abdelkrim, Ikram Guizani, Emna Harigua-Souiai\",\"doi\":\"10.3389/fcimb.2024.1403589\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Drug repurposing is a promising approach towards the discovery of novel treatments against Neglected Tropical Diseases, such as Leishmaniases, presenting the advantage of reducing both costs and duration of the drug discovery process. In previous work, our group developed a Machine Learning pipeline for the repurposing of FDA-approved drugs against <i>Leishmania</i> parasites. The present study is focused on an <i>in vitro</i> validation of this approach by assessing the antileishmanial effects of 10 predicted drug candidates. First, we evaluated the drugs' activity against promastigotes from two strains of <i>L. infantum</i> and one of <i>L. major</i>, which caused distinct clinical manifestations, using an MTT assay. The standard anti-<i>Leishmania</i> drug Amphotericin B was used as a positive control. Five molecules demonstrated anti-<i>Leishmania</i> effects, out of which Acebutolol, Prilocaine and Phenylephrine are described herein for the first time. When tested on promastigote growth, Acebutolol displayed IC<sub>50</sub> values ranging from 69.28 to 145.53 µg/mL. Prilocaine exhibited IC<sub>50</sub> values between 33.10 and 45.81 µg/mL. Phenylephrine, on the other hand, presented IC<sub>50</sub> values >200 µg/mL. The two remaining drugs, Dibucaine and Domperidone, exhibited significantly low IC<sub>50</sub> values varying between 0.58 and 1.05 µg/mL, and 6.30 and 8.17 µg/mL, respectively. Both compounds were previously described as anti-<i>Leishmania</i> agents <i>in vivo</i>. All five compounds demonstrated no notable cytotoxic effects on THP-1-derived macrophages at the IC<sub>50</sub> concentrations, allowing for their testing on the intracellular form of <i>L. major</i> and <i>L. infantum</i> parasites. Interestingly, all compounds exhibited antileishmanial activity on amastigotes with enhanced IC<sub>50</sub> values compared to the corresponding promastigotes. Noticeably, Dibucaine and Domperidone displayed IC<sub>50</sub> values of at most 1.99 µg/mL. Acebutolol, Prilocaine and Phenylephrine showed IC<sub>50</sub> values ranging from 13.84 to 66.81 µg/mL. Our previously published Computer-Aided repositioning pipelines of FDA-approved drugs as antileishmanial agents identified Dibucaine and Domperidone as candidates in support of previous <i>in vivo</i> studies. This study consolidates such findings through the <i>in vitro</i> validation against 2 <i>Leishmania</i> species, highly prevalent in Africa and Middle East, and reveals Acebutolol, Prilocaine, and Phenylephrine as novel anti-<i>Leishmania</i> effectors, confirming the relevance of our approach and calling for further investigations.</p>\",\"PeriodicalId\":12458,\"journal\":{\"name\":\"Frontiers in Cellular and Infection Microbiology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2024-09-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464777/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Cellular and Infection Microbiology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3389/fcimb.2024.1403589\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"IMMUNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Cellular and Infection Microbiology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3389/fcimb.2024.1403589","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
Approved drugs successfully repurposed against Leishmania based on machine learning predictions.
Drug repurposing is a promising approach towards the discovery of novel treatments against Neglected Tropical Diseases, such as Leishmaniases, presenting the advantage of reducing both costs and duration of the drug discovery process. In previous work, our group developed a Machine Learning pipeline for the repurposing of FDA-approved drugs against Leishmania parasites. The present study is focused on an in vitro validation of this approach by assessing the antileishmanial effects of 10 predicted drug candidates. First, we evaluated the drugs' activity against promastigotes from two strains of L. infantum and one of L. major, which caused distinct clinical manifestations, using an MTT assay. The standard anti-Leishmania drug Amphotericin B was used as a positive control. Five molecules demonstrated anti-Leishmania effects, out of which Acebutolol, Prilocaine and Phenylephrine are described herein for the first time. When tested on promastigote growth, Acebutolol displayed IC50 values ranging from 69.28 to 145.53 µg/mL. Prilocaine exhibited IC50 values between 33.10 and 45.81 µg/mL. Phenylephrine, on the other hand, presented IC50 values >200 µg/mL. The two remaining drugs, Dibucaine and Domperidone, exhibited significantly low IC50 values varying between 0.58 and 1.05 µg/mL, and 6.30 and 8.17 µg/mL, respectively. Both compounds were previously described as anti-Leishmania agents in vivo. All five compounds demonstrated no notable cytotoxic effects on THP-1-derived macrophages at the IC50 concentrations, allowing for their testing on the intracellular form of L. major and L. infantum parasites. Interestingly, all compounds exhibited antileishmanial activity on amastigotes with enhanced IC50 values compared to the corresponding promastigotes. Noticeably, Dibucaine and Domperidone displayed IC50 values of at most 1.99 µg/mL. Acebutolol, Prilocaine and Phenylephrine showed IC50 values ranging from 13.84 to 66.81 µg/mL. Our previously published Computer-Aided repositioning pipelines of FDA-approved drugs as antileishmanial agents identified Dibucaine and Domperidone as candidates in support of previous in vivo studies. This study consolidates such findings through the in vitro validation against 2 Leishmania species, highly prevalent in Africa and Middle East, and reveals Acebutolol, Prilocaine, and Phenylephrine as novel anti-Leishmania effectors, confirming the relevance of our approach and calling for further investigations.
期刊介绍:
Frontiers in Cellular and Infection Microbiology is a leading specialty journal, publishing rigorously peer-reviewed research across all pathogenic microorganisms and their interaction with their hosts. Chief Editor Yousef Abu Kwaik, University of Louisville is supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.
Frontiers in Cellular and Infection Microbiology includes research on bacteria, fungi, parasites, viruses, endosymbionts, prions and all microbial pathogens as well as the microbiota and its effect on health and disease in various hosts. The research approaches include molecular microbiology, cellular microbiology, gene regulation, proteomics, signal transduction, pathogenic evolution, genomics, structural biology, and virulence factors as well as model hosts. Areas of research to counteract infectious agents by the host include the host innate and adaptive immune responses as well as metabolic restrictions to various pathogenic microorganisms, vaccine design and development against various pathogenic microorganisms, and the mechanisms of antibiotic resistance and its countermeasures.