全面分析乳腺癌基因 1 (BRCA-1) 在膀胱癌中的意义。

IF 2.5 4区 医学 Q3 ONCOLOGY
Cancer Management and Research Pub Date : 2024-09-30 eCollection Date: 2024-01-01 DOI:10.2147/CMAR.S467817
Xinyu Zhang, Xiaoxuan Tao, Yuxin Zhou, Guangyue Shi, Tianjiao Wang
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引用次数: 0

摘要

背景:膀胱癌(BLCA)的特点是发病率高、死亡率高、治疗费用高。乳腺癌基因 1(BRCA1)是一种肿瘤抑制基因,可抑制恶性肿瘤的发展。然而,有关 BRCA1 在 BLCA 中重要性的研究还很有限。本研究旨在利用生物信息学方法和免疫组化技术探讨 BRCA1 在 BLCA 中的重要性:方法:通过 UCSC Xena 平台(http://xena.ucsc.edu/)从 TCGA 数据库中收集基因表达、临床和生存数据。利用 GEPIA 数据库(http://GEPIA.cancer-pku.cn)整合了来自 TCGA 和 GETEx 数据库的 TPM 数据。研究随后探讨了 BLCA 中 BRCA1 的差异表达、生存预后、功能富集和免疫细胞浸润分析。利用 STRING 数据库构建了 BRCA1 的 PPI 网络,并利用 GeneMANIA 数据库生成了 BRCA1 相关基因-基因相互作用网络。免疫组化(IHC)检测验证了 BRCA1 在膀胱肿瘤组织和邻近正常组织中的表达水平:结果:BRCA1 与 BLCA 相关。差异分析表明,BRCA1 是膀胱癌的一个危险因素,但在不同性别、分期、肿瘤分期、淋巴结分期或转移分期中,BRCA1 的表达并无明显差异。此外,BLCA 的分期是根据美国癌症联合委员会(AJCC)第八版进行的。共表达网络和基因组富集分析(GESA)证实 BRCA1 参与了 BLCA 的各种通路。此外,BRCA1 的表达还与免疫细胞浸润有关。然而,生存预后分析表明,BLCA 的预后与 BRCA1 之间无明显相关性:我们证明了 BRCA1 是 BLCA 的前瞻性预测和免疫生物标志物,为潜在疗法提供了新途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comprehensive Analysis of the Significance of Breast Cancer Gene 1 (BRCA-1) in Bladder Cancer.

Background: Bladder carcinoma (BLCA) is characterized by high morbidity, mortality, and treatment costs. Breast cancer gene 1 (BRCA1), a tumor suppressor gene, inhibits the development of malignant tumors. However, research on the significance of BRCA1 in BLCA is limited. This study aims to explore the importance of BRCA1 in BLCA using bioinformatic methods and immunohistochemistry.

Methods: Gene expression, clinical, and survival data were collected from the TCGA databases through the UCSC Xena platform (http://xena.ucsc.edu/). The TPM data from the TCGA and GETEx databases were integrated using the GEPIA database (http://GEPIA.cancer-pku.cn). The study then explored the differential expression, survival prognosis, functional enrichment, and immune cell infiltration analyses of BRCA1 in BLCA. A PPI network of BRCA1 was constructed using the STRING database, and a BRCA1-associated gene-gene interaction network was generated using the GeneMANIA database. Immunohistochemistry (IHC) assays were performed to verify the expression levels of BRCA1 in bladder tumour tissues and adjacent normal tissues.

Results: BRCA1 is associated with BLCA. Differential analysis indicated that BRCA1 acts as a risk factor for BLCA but does not show significant expression differences across genders, stages, tumor stages, lymph node stages, or metastasis stages. Additionally, staging was based on the eighth edition of the American Joint Committee on Cancer (AJCC) for BLCA. Co-expression network and Gene Set Enrichment Analysis (GESA) confirmed that BRCA1 is involved in various BLCA pathways. Furthermore, BRCA1 expression was also linked to immune cell infiltration. However, survival prognosis analysis revealed no significant correlation between the prognosis of BLCA and BRCA1.

Conclusion: We demonstrated that BRCA1 is a prospective predicted and immunological biomarker in BLCA, offering new avenues for potential therapies.

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来源期刊
Cancer Management and Research
Cancer Management and Research Medicine-Oncology
CiteScore
7.40
自引率
0.00%
发文量
448
审稿时长
16 weeks
期刊介绍: Cancer Management and Research is an international, peer reviewed, open access journal focusing on cancer research and the optimal use of preventative and integrated treatment interventions to achieve improved outcomes, enhanced survival, and quality of life for cancer patients. Specific topics covered in the journal include: ◦Epidemiology, detection and screening ◦Cellular research and biomarkers ◦Identification of biotargets and agents with novel mechanisms of action ◦Optimal clinical use of existing anticancer agents, including combination therapies ◦Radiation and surgery ◦Palliative care ◦Patient adherence, quality of life, satisfaction The journal welcomes submitted papers covering original research, basic science, clinical & epidemiological studies, reviews & evaluations, guidelines, expert opinion and commentary, and case series that shed novel insights on a disease or disease subtype.
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