澳大利亚水龙（Intellagama lesueurii）的基因组--城市适应性的蚕食模式。

IF 3 2区生物学 Q2 EVOLUTIONARY BIOLOGY

Journal of Heredity Pub Date : 2024-10-04 DOI:10.1093/jhered/esae054

Daniel Powell, Nicola Jackson, Parwinder Kaur, Olga Dudchenko, Erez Lieberman Aiden, Arthur Georges, Céline H Frère

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引用次数: 0

摘要

有鳞类爬行动物是四足动物中种类繁多、引人入胜的一类，为羊膜动物的进化提供了宝贵的见解。澳大利亚水龙（Intellagama lesueurii）是水龙科（Agamidae）的成员，也是澳大利亚中生代核心特有辐射（两栖龙科）的姊妹。该物种以其城市适应性和复杂的社会系统而闻名。我们报告了 1.8 Gb 染色体长度的基因组组装以及 23,675 个蛋白质编码基因的注释。与其他有鳞类基因组的比较分析突出了与免疫功能、能量平衡和伤口愈合相关的基因家族的扩展。该参考基因组将成为研究蜥蜴进化和环境适应能力的宝贵资源。

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The genome of the Australian water dragon (Intellagama lesueurii), an agamid model for urban adaptation.

Squamate reptiles are a highly diverse and intriguing group of tetrapods, offering valuable insights into the evolution of amniotes. The Australian water dragon (Intellagama lesueurii) is a member of the Agamidae, and sister to the core mesic Australian endemic radiation (Amphibolurinae). The species is renowned for its urban adaptability and complex social systems. We report a 1.8 Gb chromosome-length genome assembly together with the annotation of 23,675 protein-coding genes. Comparative analysis with other squamate genomes highlights gene family expansions associated with immune function, energetic homeostasis, and wound healing. This reference genome will serve as a valuable resource for studies of evolution and environmental resilience in lizards.

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来源期刊

Journal of Heredity 生物-遗传学

CiteScore

5.20

自引率

6.50%

发文量

审稿时长

6-12 weeks

期刊介绍： Over the last 100 years, the Journal of Heredity has established and maintained a tradition of scholarly excellence in the publication of genetics research. Virtually every major figure in the field has contributed to the journal. Established in 1903, Journal of Heredity covers organismal genetics across a wide range of disciplines and taxa. Articles include such rapidly advancing fields as conservation genetics of endangered species, population structure and phylogeography, molecular evolution and speciation, molecular genetics of disease resistance in plants and animals, genetic biodiversity and relevant computer programs.