从带尾河豚(Sphoeroides spengleri)皮肤中分离出的新的假单胞菌(Pseudoalteromonas simplex sp.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Hannah K Mattsson, Mayanne A M de Freitas, Gustavo P R de Azevedo, Vinicius Salazar, Verônica V Vieira, Diogo A Tschoeke, Cristiane C Thompson, Fabiano L Thompson
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引用次数: 0

摘要

一种新型细菌分离物 A520T(A520T = CBAS 737T = CAIM 1944T)取自在 Arraial do Cabo(巴西里约热内卢)采集的带尾河豚(四齿鱼科)的皮肤。A520T 是革兰氏染色阴性、鞭毛和需氧细菌。最适生长温度为 25-30 °C,存在 3% 的氯化钠。该新型分离菌的基因组序列为 4.5 Mb(4082 个编码基因,G+C 含量为 41.1%)。最近的系统发育邻居是 Pseudoalteromonas shioyasakiensis JCM 18891T(16S rRNA 序列相似度为 97.9%,平均氨基酸相同度为 94.8%,平均核苷酸相同度为 93%,基因组间距离相似度为 51.8%)。有几种硅表型特征有助于将 A520T 与其系统发育上的近邻区分开来,这些特征包括:三卤糖、D-甘露糖、纤维生物糖、吡咯烷酮基-beta-萘甲酰胺、淀粉水解、D-木糖、乳糖、酒石酸利用、蔗糖、酒石酸盐利用、蔗糖、柠檬酸盐、甘油、粘液酸盐和醋酸盐利用、丙二酸盐、葡萄糖氧化剂、葡萄糖产生的气体、亚硝酸盐转化为气体、L-鼠李糖、鸟氨酸脱羧酶、赖氨酸脱羧酶和黄色素。该新物种的基因组包含 3 个基因簇(总计约 66.81 Kbp),编码不同类型的生物活性化合物,这些化合物可能显示了与带尾河豚宿主有关的生态作用。根据基于基因组的分类方法,菌株 A520T(A520T = CBAS 737T = CAIM 1944T)被认为是一个新物种,即 Pseudoalteromonas simplex sp.
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Pseudoalteromonas simplex sp. nov. Isolated from the Skin of Bandtail Puffer Fish (Sphoeroides spengleri).

A novel bacterial isolate A520T (A520T = CBAS 737T = CAIM 1944T) was obtained from the skin of bandtail puffer fish Sphoeroides spengleri (Tetraodontidae Family), collected in Arraial do Cabo (Rio de Janeiro, Brazil). A520T is Gram-stain-negative, flagellated and aerobic bacteria. Optimum growth occurs at 25-30 °C in the presence of 3% NaCl. The genome sequence of the novel isolate consisted of 4.5 Mb (4082 coding genes and G+C content of 41.1%). The closest phylogenetic neighbor was Pseudoalteromonas shioyasakiensis JCM 18891T (97.9% 16S rRNA sequence similarity, 94.8% Average Amino Acid Identity, 93% Average Nucleotide Identity and 51.8% similarity in Genome-to-Genome-Distance). Several in silico phenotypic features are useful to differentiate A520T from its closest phylogenetic neighbors, including trehalose, D-mannose, cellobiose, pyrrolidonyl-beta-naphthylamide, starch hydrolysis, D-xylose, lactose, tartrate utilization, sucrose, citrate, glycerol, mucate and acetate utilization, malonate, glucose oxidizer, gas from glucose, nitrite to gas, L-rhamnose, ornithine decarboxylase, lysine decarboxylase and yellow pigment. The genome of the novel species contains 3 gene clusters (~ 66.81 Kbp in total) coding for different types of bioactive compounds that could indicate ecological roles pertaining to the bandtail puffer fish host. Based on genome-based taxonomic approach, strain A520T (A520T = CBAS 737T = CAIM 1944T) is proposed as a new species, Pseudoalteromonas simplex sp. nov.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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