酶设计和活性增强的前沿计算方法

IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
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引用次数: 0

摘要

酶活性在生物催化中至关重要,因此提高酶性能的方法成为研究的重点。计算设计提供了提高酶活性的有效方法,从而将其应用扩展到各个领域。本综述重点介绍了三种主要计算方法:分子动力学模拟、Rosetta 和机器学习,并探讨了在酶工程中使用这些方法快速提高酶活性的最新进展。这些技术为酶活性优化提供了新的视角,大大降低了传统筛选过程的复杂性。通过整合这些先进的计算方法,可以更快地设计出高活性酶,加快蛋白质工程和合成生物学的进展。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Cutting-edge computational approaches in enzyme design and activity enhancement
Enzyme activity is crucial in biocatalysis, making methods to enhance enzyme performance a major focus of research. Computational design provides an efficient approach to boosting enzyme activity, thereby expanding its applications across various fields. This review highlights three main computational methods: molecular dynamics simulations, Rosetta, and machine learning, and explores recent advances in their use for rapidly enhancing enzyme activity in enzyme engineering. These techniques provide a novel perspective on enzyme activity optimization, significantly reducing the complexity of traditional screening processes. By integrating these advanced computational approaches, high-activity enzymes can be designed more rapidly, accelerating progress in protein engineering and synthetic biology.
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来源期刊
Biochemical Engineering Journal
Biochemical Engineering Journal 工程技术-工程:化工
CiteScore
7.10
自引率
5.10%
发文量
380
审稿时长
34 days
期刊介绍: The Biochemical Engineering Journal aims to promote progress in the crucial chemical engineering aspects of the development of biological processes associated with everything from raw materials preparation to product recovery relevant to industries as diverse as medical/healthcare, industrial biotechnology, and environmental biotechnology. The Journal welcomes full length original research papers, short communications, and review papers* in the following research fields: Biocatalysis (enzyme or microbial) and biotransformations, including immobilized biocatalyst preparation and kinetics Biosensors and Biodevices including biofabrication and novel fuel cell development Bioseparations including scale-up and protein refolding/renaturation Environmental Bioengineering including bioconversion, bioremediation, and microbial fuel cells Bioreactor Systems including characterization, optimization and scale-up Bioresources and Biorefinery Engineering including biomass conversion, biofuels, bioenergy, and optimization Industrial Biotechnology including specialty chemicals, platform chemicals and neutraceuticals Biomaterials and Tissue Engineering including bioartificial organs, cell encapsulation, and controlled release Cell Culture Engineering (plant, animal or insect cells) including viral vectors, monoclonal antibodies, recombinant proteins, vaccines, and secondary metabolites Cell Therapies and Stem Cells including pluripotent, mesenchymal and hematopoietic stem cells; immunotherapies; tissue-specific differentiation; and cryopreservation Metabolic Engineering, Systems and Synthetic Biology including OMICS, bioinformatics, in silico biology, and metabolic flux analysis Protein Engineering including enzyme engineering and directed evolution.
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