Zhongbin Xia, Siwen Zong, Sibin Zhou, Yujie Rao, Zhenjiang Li
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引用次数: 0
摘要
背景:类风湿关节炎(RA)是一种病因不明的慢性全身性自身免疫性疾病。铜中毒是一种新型的细胞死亡形式,其特征是由铜离子引起的细胞毒性。迄今为止,杯突相关基因胶体素(GLS)与 RA 的关系尚无定论:所有原始数据均来自基因表达总库(GEO)公共数据库。方法:从基因表达总库(GEO)公共数据库中检索所有原始数据,评估 RA 与健康样本之间基因的表达水平,以确定差异表达基因。然后,使用 LASSO 回归筛选疾病特征基因,并根据五个枢纽基因构建了预测疾病评分的提名图。利用定量实时 PCR(qRT-PCR)进行了验证实验,以检测最重要的 CRGs。最后,通过孟德尔随机化方法分析了GLS与RA之间的因果关系:结果:在正常样本和 RA 样本之间发现了 5 个差异表达的 CRG(NLRP3、ATP7A、MTF1、GLS 和 DBT),通过 LASSO 回归分析验证了所有这些基因都是疾病特异性基因。同时,提名图显示 RA 与 GLS 的表达呈正相关。此外,q-PCR 显示,与对照组相比,GLS 在 RA 患者中的表达水平更高。综上所述,通过孟德尔随机法证实了 GLS 与 RA 之间的因果关系:结论:GLS 是一种杯突相关基因,与 RA 密切相关,在 RA 的诊断中起着重要作用。要点 - 孟德尔随机化法证实了 GLS 与 RA 之间的因果关系。
Rheumatoid arthritis and gliostatin: a two-sample Mendelian randomization analysis and RT-PCR validation.
Background: Rheumatoid arthritis (RA) is a chronic systemic autoimmune disease of unknown etiology. Cuproptosis, a novel form of cell death, is characterized by cytotoxicity originating from copper ions. To date, the relationship between cuproptosis-related gene gliostatin (GLS) and RA.
Methods: All raw data were retrieved from the Gene Expression Omnibus (GEO) public database. The expression level of genes between RA and healthy samples was evaluated to identify differentially expressed genes. Then, LASSO regression was used to screen disease signature genes, and a nomogram was constructed based on five hub genes to predict disease scores. Validation experiments were performed using quantitative real-time PCR (qRT-PCR) to detect the most significant CRGs. Finally, the causal relationship between GLS and RA was analyzed through Mendelian randomization methodology.
Results: Five differentially expressed CRGs (NLRP3, ATP7A, MTF1, GLS, and DBT) were identified between normal and RA samples, all of which were validated as disease-specific genes through LASSO regression analysis. Meanwhile, the nomogram demonstrated a positive correlation between RA and the expression of GLS. Furthermore, q-PCR revealed that the expression level of GLS was higher in RA patients compared to those in the control group. Taken together, a causal relationship between GLS and RA was corroborated through Mendelian randomization.
Conclusion: GLS, a cuproptosis-related gene, is closely associated with RA and plays a significant role in its diagnosis. Key Points • The causal relationship between GLS and RA is proved by Mendelian randomization.
期刊介绍:
Clinical Rheumatology is an international English-language journal devoted to publishing original clinical investigation and research in the general field of rheumatology with accent on clinical aspects at postgraduate level.
The journal succeeds Acta Rheumatologica Belgica, originally founded in 1945 as the official journal of the Belgian Rheumatology Society. Clinical Rheumatology aims to cover all modern trends in clinical and experimental research as well as the management and evaluation of diagnostic and treatment procedures connected with the inflammatory, immunologic, metabolic, genetic and degenerative soft and hard connective tissue diseases.