{"title":"使用 mitoBEs 进行有效和链选择性线粒体碱基编辑的简化流程。","authors":"Xiaoxue Zhang, Zongyi Yi, Wei Tang, Wensheng Wei","doi":"10.52601/bpr.2024.240010","DOIUrl":null,"url":null,"abstract":"<p><p>Mitochondrial base editing tools hold great promise for the investigation and treatment of mitochondrial diseases. Mitochondrial DNA base editors (mitoBEs) integrate a programmable transcription-activator-like effector (TALE) protein with single-stranded DNA deaminase (TadA8e-V106W, APOBEC1, <i>etc</i>.) and nickase (MutH, Nt.BspD6I(C), <i>etc</i>.) to achieve heightened precision and efficiency in mitochondrial base editing. This innovative mitochondrial base editing tool exhibits a number of advantages, including strand-selectivity for editing, high efficiency, and the capacity to perform diverse types of base editing on the mitochondrial genome by employing various deaminases. In this context, we provide a detailed experimental protocol for mitoBEs to assist others in achieving proficient mitochondrial base editing.</p>","PeriodicalId":93906,"journal":{"name":"Biophysics reports","volume":"10 4","pages":"191-200"},"PeriodicalIF":0.0000,"publicationDate":"2024-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11399887/pdf/","citationCount":"0","resultStr":"{\"title\":\"Streamlined process for effective and strand-selective mitochondrial base editing using mitoBEs.\",\"authors\":\"Xiaoxue Zhang, Zongyi Yi, Wei Tang, Wensheng Wei\",\"doi\":\"10.52601/bpr.2024.240010\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Mitochondrial base editing tools hold great promise for the investigation and treatment of mitochondrial diseases. Mitochondrial DNA base editors (mitoBEs) integrate a programmable transcription-activator-like effector (TALE) protein with single-stranded DNA deaminase (TadA8e-V106W, APOBEC1, <i>etc</i>.) and nickase (MutH, Nt.BspD6I(C), <i>etc</i>.) to achieve heightened precision and efficiency in mitochondrial base editing. This innovative mitochondrial base editing tool exhibits a number of advantages, including strand-selectivity for editing, high efficiency, and the capacity to perform diverse types of base editing on the mitochondrial genome by employing various deaminases. In this context, we provide a detailed experimental protocol for mitoBEs to assist others in achieving proficient mitochondrial base editing.</p>\",\"PeriodicalId\":93906,\"journal\":{\"name\":\"Biophysics reports\",\"volume\":\"10 4\",\"pages\":\"191-200\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-08-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11399887/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biophysics reports\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.52601/bpr.2024.240010\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biophysics reports","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.52601/bpr.2024.240010","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
线粒体碱基编辑工具为线粒体疾病的研究和治疗带来了巨大希望。线粒体 DNA 碱基编辑器(mitoBEs)将可编程转录激活剂样效应蛋白(TALE)与单链 DNA 脱氨酶(TadA8e-V106W、APOBEC1 等)和缺口酶(MutH、Nt.BspD6I(C) 等)整合在一起,以提高线粒体碱基编辑的精度和效率。这种创新的线粒体碱基编辑工具具有多种优势,包括编辑链的选择性、高效率以及通过使用各种脱氨酶对线粒体基因组进行多种类型碱基编辑的能力。在此背景下,我们提供了详细的线粒体碱基编辑实验方案,以帮助其他人实现熟练的线粒体碱基编辑。
Streamlined process for effective and strand-selective mitochondrial base editing using mitoBEs.
Mitochondrial base editing tools hold great promise for the investigation and treatment of mitochondrial diseases. Mitochondrial DNA base editors (mitoBEs) integrate a programmable transcription-activator-like effector (TALE) protein with single-stranded DNA deaminase (TadA8e-V106W, APOBEC1, etc.) and nickase (MutH, Nt.BspD6I(C), etc.) to achieve heightened precision and efficiency in mitochondrial base editing. This innovative mitochondrial base editing tool exhibits a number of advantages, including strand-selectivity for editing, high efficiency, and the capacity to perform diverse types of base editing on the mitochondrial genome by employing various deaminases. In this context, we provide a detailed experimental protocol for mitoBEs to assist others in achieving proficient mitochondrial base editing.