Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett
{"title":"Chlorophonia sclateri (Fringillidae, Passeriformes),波多黎各 Euphonia 的完整基因组序列。","authors":"Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett","doi":"10.56179/001c.123420","DOIUrl":null,"url":null,"abstract":"<p><p>The Puerto Rican Euphonia (<i>Chlorophonia sclateri</i>) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of <i>Chlorophonia sclateri</i>. Illumina paired-end reads were assembled by a <i>de novo</i> method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).</p>","PeriodicalId":72362,"journal":{"name":"Biodiversity genomes","volume":"2024 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11414600/pdf/","citationCount":"0","resultStr":"{\"title\":\"The Complete Genome Sequence of <i>Chlorophonia sclateri</i> (Fringillidae, Passeriformes), the Puerto Rican Euphonia.\",\"authors\":\"Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett\",\"doi\":\"10.56179/001c.123420\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The Puerto Rican Euphonia (<i>Chlorophonia sclateri</i>) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of <i>Chlorophonia sclateri</i>. Illumina paired-end reads were assembled by a <i>de novo</i> method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).</p>\",\"PeriodicalId\":72362,\"journal\":{\"name\":\"Biodiversity genomes\",\"volume\":\"2024 \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11414600/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biodiversity genomes\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.56179/001c.123420\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/9/6 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biodiversity genomes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.56179/001c.123420","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/6 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
The Complete Genome Sequence of Chlorophonia sclateri (Fringillidae, Passeriformes), the Puerto Rican Euphonia.
The Puerto Rican Euphonia (Chlorophonia sclateri) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of Chlorophonia sclateri. Illumina paired-end reads were assembled by a de novo method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).