在乳酸乳球菌中表达荧光报告蛋白需要优化密码子。

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
América Selene Gaona-Mendoza, Julio Armando Massange-Sánchez, José Eleazar Barboza-Corona, María Jazmín Abraham-Juárez, Luz Edith Casados-Vázquez
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引用次数: 0

摘要

乳酸乳球菌是一种革兰氏阳性细菌,用于生产发酵食品和异源蛋白质。它的 Nisin 控制基因表达系统因其多功能性和安全性而脱颖而出。然而,其基因组中较低的 GC 含量可能会导致蛋白质生产受到一些限制。在本研究中,我们探讨了密码子优化对乳酸杆菌荧光报告蛋白表达的重要性和影响。我们将三个未优化的荧光报告基因(gfp、rfp 和 mcherry)与经过密码子优化的变体(mcherry-O)进行了比较。测定了密码子适应指数(CAI)、有效密码子数(Enc)和鸟嘌呤-胞嘧啶百分比(GC%)等参数,以评估它们对基因表达和蛋白质合成的影响。非优化荧光蛋白的产生与其基因表达水平并不相关,但经过密码子优化的 mCherry-O 蛋白除外,该蛋白可在 SDS-PAGE 凝胶和提取的裂解液中检测到(肉眼检测)。mcherry 基因的表达与 mcherry-O 基因相似,但只有优化基因才能检测到蛋白。gfp 基因的表达水平最高,但通过 SDS-PAGE 无法检测到蛋白质的数量。rfp 基因是一个优化基因,但不是为乳酸菌量身定制的。这些发现强调了对外来基因在 L. lactis 中进行全面密码子优化的必要性,并揭示了表达水平、RNA 稳定性和蛋白质合成之间的复杂关系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Codon Optimization is Required to Express Fluorogenic Reporter Proteins in Lactococcus lactis.

Lactococcus lactis is a Gram-positive bacterium used to produce fermented foods and heterologous proteins. Its Nisin-controlled gene expression system stands out for its versatility and safety. However, the lower GC content in its genome may lead to some limitations in protein production. In this study, we explored the importance and effect of codon optimization on fluorescent reporter protein expression in L. lactis. Three non-optimized fluorescent reporter genes (gfp, rfp, and mcherry) were compared to the codon-optimized variant (mcherry-O). Parameters such as Codon Adaptation Index (CAI), Effective Number of Codons (Enc) and Guanine-Cytosine percentage (% GC) were determined to assess their influence on gene expression and protein synthesis. The production of non-optimized fluorescent proteins does not correlate with their gene expression levels, except for the codon-optimized mCherry-O protein, which was detected in the SDS-PAGE gel and the extracted lysate (visually detected). Expression of the mcherry gene was similar to the mcherry-O gene, but protein was only detected with the optimized gene. The gfp gene showed the highest expression levels, but the quantity of protein was undetectable by SDS-PAGE. The rfp gene was revealed to be an optimized gene but not tailored for L. lactis. These findings underscore the necessity of comprehensive codon optimization for foreign genes in L. lactis and reveal intriguing complexities between expression levels, RNA stability and protein synthesis.

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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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