斑马鱼ankha和ankhb的进化与时空表达

IF 2.2 Q3 DEVELOPMENTAL BIOLOGY
Nuwanthika Wathuliyadde, Katherine E Willmore, Gregory M Kelly
{"title":"斑马鱼ankha和ankhb的进化与时空表达","authors":"Nuwanthika Wathuliyadde, Katherine E Willmore, Gregory M Kelly","doi":"10.3390/jdb12030023","DOIUrl":null,"url":null,"abstract":"<p><p>Craniometaphyseal Dysplasia (CMD) is a rare skeletal disorder that can result from mutations in the <i>ANKH</i> gene. This gene encodes progressive anksylosis (ANK), which is responsible for transporting inorganic pyrophosphate (PPi) and ATP from the intracellular to the extracellular environment, where PPi inhibits bone mineralization. When ANK is dysfunctional, as in patients with CMD, the passage of PPi to the extracellular environment is reduced, leading to excess mineralization, particularly in bones of the skull. Zebrafish may serve as a promising model to study the mechanistic basis of CMD. Here, we provide a detailed analysis of the zebrafish Ankh paralogs, Ankha and Ankhb, in terms of their phylogenic relationship with ANK in other vertebrates as well as their spatiotemporal expression patterns during zebrafish development. We found that a closer evolutionary relationship exists between the zebrafish Ankhb protein and its human and other vertebrate counterparts, and stronger promoter activity was predicted for <i>ankhb</i> compared to <i>ankha.</i> Furthermore, we noted distinct temporal expression patterns, with <i>ankha</i> more prominently expressed in early development stages, and both paralogs also being expressed at larval growth stages. Whole-mount in situ hybridization was used to compare the spatial expression patterns of each paralog during bone development, and both showed strong expression in the craniofacial region as well as the notochord and somites. Given the substantial overlap in spatiotemporal expression but only subtle patterning differences, the exact roles of these genes remain speculative. In silico analyses predicted that Ankha and Ankhb have the same function in transporting PPi across the membrane. Nevertheless, this study lays the groundwork for functional analyses of each <i>ankh</i> paralog and highlights the potential of using zebrafish to find possible targeted therapies for CMD.</p>","PeriodicalId":15563,"journal":{"name":"Journal of Developmental Biology","volume":"12 3","pages":""},"PeriodicalIF":2.2000,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11417794/pdf/","citationCount":"0","resultStr":"{\"title\":\"Evolution and Spatiotemporal Expression of <i>ankha</i> and <i>ankhb</i> in Zebrafish.\",\"authors\":\"Nuwanthika Wathuliyadde, Katherine E Willmore, Gregory M Kelly\",\"doi\":\"10.3390/jdb12030023\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Craniometaphyseal Dysplasia (CMD) is a rare skeletal disorder that can result from mutations in the <i>ANKH</i> gene. This gene encodes progressive anksylosis (ANK), which is responsible for transporting inorganic pyrophosphate (PPi) and ATP from the intracellular to the extracellular environment, where PPi inhibits bone mineralization. When ANK is dysfunctional, as in patients with CMD, the passage of PPi to the extracellular environment is reduced, leading to excess mineralization, particularly in bones of the skull. Zebrafish may serve as a promising model to study the mechanistic basis of CMD. Here, we provide a detailed analysis of the zebrafish Ankh paralogs, Ankha and Ankhb, in terms of their phylogenic relationship with ANK in other vertebrates as well as their spatiotemporal expression patterns during zebrafish development. We found that a closer evolutionary relationship exists between the zebrafish Ankhb protein and its human and other vertebrate counterparts, and stronger promoter activity was predicted for <i>ankhb</i> compared to <i>ankha.</i> Furthermore, we noted distinct temporal expression patterns, with <i>ankha</i> more prominently expressed in early development stages, and both paralogs also being expressed at larval growth stages. Whole-mount in situ hybridization was used to compare the spatial expression patterns of each paralog during bone development, and both showed strong expression in the craniofacial region as well as the notochord and somites. Given the substantial overlap in spatiotemporal expression but only subtle patterning differences, the exact roles of these genes remain speculative. In silico analyses predicted that Ankha and Ankhb have the same function in transporting PPi across the membrane. Nevertheless, this study lays the groundwork for functional analyses of each <i>ankh</i> paralog and highlights the potential of using zebrafish to find possible targeted therapies for CMD.</p>\",\"PeriodicalId\":15563,\"journal\":{\"name\":\"Journal of Developmental Biology\",\"volume\":\"12 3\",\"pages\":\"\"},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2024-09-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11417794/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Developmental Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3390/jdb12030023\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"DEVELOPMENTAL BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Developmental Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3390/jdb12030023","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"DEVELOPMENTAL BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

颅骨骨骺发育不良(CMD)是一种罕见的骨骼疾病,可由 ANKH 基因突变引起。该基因编码渐进性焦磷酸(ANK),ANK 负责将无机焦磷酸(PPi)和 ATP 从细胞内转运到细胞外环境,PPi 在细胞外环境中抑制骨矿化。当 ANK 出现功能障碍时(如在 CMD 患者中),PPi 进入细胞外环境的通道就会减少,从而导致矿化过度,尤其是在颅骨中。斑马鱼可能是研究 CMD 机理基础的一个很有前途的模型。在这里,我们详细分析了斑马鱼 Ankh 旁系亲属 Ankha 和 Ankhb 与其他脊椎动物 ANK 的系统发育关系以及它们在斑马鱼发育过程中的时空表达模式。我们发现,斑马鱼的 Ankhb 蛋白与人类和其他脊椎动物的 Ankhb 蛋白之间存在更密切的进化关系,而且与 ankha 蛋白相比,ankhb 蛋白的启动子活性更强。此外,我们还发现了不同的时间表达模式,ankha在早期发育阶段表达更为显著,而这两种旁系亲属在幼虫生长阶段也有表达。我们采用了整装原位杂交技术来比较骨骼发育过程中每个旁系亲属的空间表达模式,结果发现这两个旁系亲属在颅面区域、脊索和体节都有很强的表达。鉴于这些基因在时空表达上有很大的重叠,但在模式上只有细微的差别,因此这些基因的确切作用仍有待推测。硅学分析预测,Ankha 和 Ankhb 在跨膜转运 PPi 方面具有相同的功能。尽管如此,这项研究为对每个ankh旁系亲属进行功能分析奠定了基础,并凸显了利用斑马鱼寻找CMD靶向疗法的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evolution and Spatiotemporal Expression of ankha and ankhb in Zebrafish.

Craniometaphyseal Dysplasia (CMD) is a rare skeletal disorder that can result from mutations in the ANKH gene. This gene encodes progressive anksylosis (ANK), which is responsible for transporting inorganic pyrophosphate (PPi) and ATP from the intracellular to the extracellular environment, where PPi inhibits bone mineralization. When ANK is dysfunctional, as in patients with CMD, the passage of PPi to the extracellular environment is reduced, leading to excess mineralization, particularly in bones of the skull. Zebrafish may serve as a promising model to study the mechanistic basis of CMD. Here, we provide a detailed analysis of the zebrafish Ankh paralogs, Ankha and Ankhb, in terms of their phylogenic relationship with ANK in other vertebrates as well as their spatiotemporal expression patterns during zebrafish development. We found that a closer evolutionary relationship exists between the zebrafish Ankhb protein and its human and other vertebrate counterparts, and stronger promoter activity was predicted for ankhb compared to ankha. Furthermore, we noted distinct temporal expression patterns, with ankha more prominently expressed in early development stages, and both paralogs also being expressed at larval growth stages. Whole-mount in situ hybridization was used to compare the spatial expression patterns of each paralog during bone development, and both showed strong expression in the craniofacial region as well as the notochord and somites. Given the substantial overlap in spatiotemporal expression but only subtle patterning differences, the exact roles of these genes remain speculative. In silico analyses predicted that Ankha and Ankhb have the same function in transporting PPi across the membrane. Nevertheless, this study lays the groundwork for functional analyses of each ankh paralog and highlights the potential of using zebrafish to find possible targeted therapies for CMD.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Developmental Biology
Journal of Developmental Biology Biochemistry, Genetics and Molecular Biology-Developmental Biology
CiteScore
4.10
自引率
18.50%
发文量
44
审稿时长
11 weeks
期刊介绍: The Journal of Developmental Biology (ISSN 2221-3759) is an international, peer-reviewed, quick-refereeing, open access journal, which publishes reviews, research papers and communications on the development of multicellular organisms at the molecule, cell, tissue, organ and whole organism levels. Our aim is to encourage researchers to effortlessly publish their new findings or concepts rapidly in an open access medium, overseen by their peers. There is no restriction on the length of the papers; the full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material. Journal of Developmental Biology focuses on: -Development mechanisms and genetics -Cell differentiation -Embryonal development -Tissue/organism growth -Metamorphosis and regeneration of the organisms. It involves many biological fields, such as Molecular biology, Genetics, Physiology, Cell biology, Anatomy, Embryology, Cancer research, Neurobiology, Immunology, Ecology, Evolutionary biology.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信