蛋白质组学和生物信息学研究发现,FGF8 和相关枢纽基因的过表达与卵巢癌的进展和预后不良有关。

IF 3.4 Q2 BIOCHEMICAL RESEARCH METHODS
Biochemistry Research International Pub Date : 2024-09-13 eCollection Date: 2024-01-01 DOI:10.1155/2024/4288753
Vikrant Kumar, Anil Kumar Tomar, Ayushi Thapliyal, Savita Yadav
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引用次数: 0

摘要

卵巢癌无症状、复发率高、对铂类化疗具有抗药性,这些特点凸显了寻找新的诊断和治疗靶点并确定其特性的必要性。虽然先前的研究已将成纤维细胞生长因子 8(FGF8)的异常表达与各种癌症类型联系起来,但其确切作用仍难以捉摸。最近,我们观察到 FGF8 的沉默降低了卵巢癌细胞的促癌特性,因此,本研究旨在了解 FGF8 如何调控卵巢癌的发展。基于LC-MS/MS的定量蛋白质组学分析发现了418个DEPs,其中大部分在FGF8沉默的卵巢癌细胞中被下调。其中许多 DEPs 与癌症进展和不良预后有关。为了解读DEPs的生物学意义,研究人员进行了生物信息学分析,包括基因本体、通路分析、蛋白-蛋白相互作用网络和枢纽基因的表达分析。与对照组相比,在FGF8蛋白网络中发现的枢纽基因在卵巢癌中上调,并且与不良预后有关。随后,中心基因的表达与患者的生存和肿瘤微环境的调节相关。结论是,FGF8和相关的枢纽基因有助于卵巢癌的进展,它们的过度表达可能导致更高的免疫浸润、预后不良和生存率低下。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Proteomics and Bioinformatics Investigations Link Overexpression of FGF8 and Associated Hub Genes to the Progression of Ovarian Cancer and Poor Prognosis.

Ovarian cancer's asymptomatic nature, high recurrence rate, and resistance to platinum-based chemotherapy highlight the need to find and characterize new diagnostic and therapeutic targets. While prior studies have linked aberrant expression of fibroblast growth factor 8 (FGF8) to various cancer types, its precise role has remained elusive. Recently, we observed that FGF8 silencing reduces the cancer-promoting properties of ovarian cancer cells, and thus, this study aimed to understand how FGF8 regulates the development of ovarian cancer. LC-MS/MS-based quantitative proteomics analysis identified 418 DEPs, and most of them were downregulated in FGF8-silenced ovarian cancer cells. Many of these DEPs are associated with cancer progression and unfavorable prognosis. To decipher the biological significance of DEPs, bioinformatics analyses encompassing gene ontology, pathway analysis, protein-protein interaction networks, and expression analysis of hub genes were carried out. Hub genes identified in the FGF8 protein network were upregulated in ovarian cancer compared to controls and were linked to poor prognosis. Subsequently, the expression of hub genes was correlated with patient survival and regulation of the tumor microenvironment. Conclusively, FGF8 and associated hub genes help in the progression of ovarian cancer, and their overexpression may lead to higher immune infiltration, poor prognosis, and poor survival.

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来源期刊
Biochemistry Research International
Biochemistry Research International BIOCHEMICAL RESEARCH METHODS-
CiteScore
6.30
自引率
0.00%
发文量
27
审稿时长
14 weeks
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