Xiaofei Ding, Siyuan Ge, Jing Chen, Long Qi, Jiufeng Wei, Hufang Zhang, Chi Hao, Qing Zhao
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However, the AT content was higher in the mitochondrial genomes of phytophagous bugs than that of predatory bugs. Moreover, phytophagous bugs prefer codon usage patterns ending in A/T compared with predatory bugs. The evolution rate of predatory bugs was lower than that of phytophagous bugs. The phylogenetic relationships across phytophagous bugs' lineages were largely consistent at depth nodes based on different datasets and tree-reconstructing methods, and strongly supported the monophyly of predatory bugs. Additionally, the estimated divergence times indicated that Pentatomidae explosively radiated in the Early Cretaceous. Subsequently, the subfamily Asopinae and the genus <i>Menida</i> diverged in the Late Cretaceous. Our research results provide data supporting for the evolutionary patterns and classification of Pentatomidae.</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ece3.70320","citationCount":"0","resultStr":"{\"title\":\"Differences between phytophagous and predatory species in Pentatomidae based on the mitochondrial genome\",\"authors\":\"Xiaofei Ding, Siyuan Ge, Jing Chen, Long Qi, Jiufeng Wei, Hufang Zhang, Chi Hao, Qing Zhao\",\"doi\":\"10.1002/ece3.70320\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Pentatomidae includes many species of significant economic value as plant pests and biological control agents. The feeding habits of Pentatomidae are closely related to their energy metabolism and ecological adaptations. In this study, we sequenced the mitochondrial genomes of 12 Asopinae species using the next-generation sequencing to explore the effect of dietary changes on mitochondrial genome evolution. Notably, all sequences were double-stranded circular DNA molecules containing 37 genes and one control region. We then compared and analyzed the mitochondrial genome characteristics of phytophagous and predatory bugs. Notably, no significant difference was observed in the length of the mitochondrial genomes between the predatory and phytophagous bugs. However, the AT content was higher in the mitochondrial genomes of phytophagous bugs than that of predatory bugs. Moreover, phytophagous bugs prefer codon usage patterns ending in A/T compared with predatory bugs. The evolution rate of predatory bugs was lower than that of phytophagous bugs. The phylogenetic relationships across phytophagous bugs' lineages were largely consistent at depth nodes based on different datasets and tree-reconstructing methods, and strongly supported the monophyly of predatory bugs. Additionally, the estimated divergence times indicated that Pentatomidae explosively radiated in the Early Cretaceous. Subsequently, the subfamily Asopinae and the genus <i>Menida</i> diverged in the Late Cretaceous. 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引用次数: 0
摘要
五蠹科包括许多具有重要经济价值的物种,可作为植物害虫和生物控制剂。五蠹科昆虫的取食习性与其能量代谢和生态适应性密切相关。在本研究中,我们利用新一代测序技术对 12 种五步蛇科昆虫的线粒体基因组进行了测序,以探讨食性变化对线粒体基因组进化的影响。值得注意的是,所有序列均为双链环状DNA分子,包含37个基因和一个控制区。然后,我们比较分析了植食性和捕食性虫子的线粒体基因组特征。值得注意的是,在线粒体基因组的长度上,捕食性虫类和植食性虫类没有明显差异。不过,植食性昆虫线粒体基因组中的 AT 含量高于捕食性昆虫。此外,与捕食性虫子相比,植食性虫子更喜欢以A/T结尾的密码子使用模式。捕食性虫类的进化速度低于植食性虫类。根据不同的数据集和树状结构重建方法,植食性蝽各系在深度节点上的系统发生关系基本一致,有力地支持了捕食性蝽的单系性。此外,估计的分化时间表明,五节虫科在早白垩世出现了爆炸性的辐射。随后,桡足亚科(Asopinae)和Menida属(Menida)在晚白垩世分化。我们的研究结果为五蠹科的演化模式和分类提供了数据支持。
Differences between phytophagous and predatory species in Pentatomidae based on the mitochondrial genome
Pentatomidae includes many species of significant economic value as plant pests and biological control agents. The feeding habits of Pentatomidae are closely related to their energy metabolism and ecological adaptations. In this study, we sequenced the mitochondrial genomes of 12 Asopinae species using the next-generation sequencing to explore the effect of dietary changes on mitochondrial genome evolution. Notably, all sequences were double-stranded circular DNA molecules containing 37 genes and one control region. We then compared and analyzed the mitochondrial genome characteristics of phytophagous and predatory bugs. Notably, no significant difference was observed in the length of the mitochondrial genomes between the predatory and phytophagous bugs. However, the AT content was higher in the mitochondrial genomes of phytophagous bugs than that of predatory bugs. Moreover, phytophagous bugs prefer codon usage patterns ending in A/T compared with predatory bugs. The evolution rate of predatory bugs was lower than that of phytophagous bugs. The phylogenetic relationships across phytophagous bugs' lineages were largely consistent at depth nodes based on different datasets and tree-reconstructing methods, and strongly supported the monophyly of predatory bugs. Additionally, the estimated divergence times indicated that Pentatomidae explosively radiated in the Early Cretaceous. Subsequently, the subfamily Asopinae and the genus Menida diverged in the Late Cretaceous. Our research results provide data supporting for the evolutionary patterns and classification of Pentatomidae.