快速设计和分析具有位置偏好的气体检测肽芯片的通用策略

IF 5.4 Q1 CHEMISTRY, ANALYTICAL
Honghao Zhang , Xi Zhang , Yingjun Si , Hui Li , Jiyang Han , Chuan Yang , Hui Yang
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引用次数: 0

摘要

气体检测芯片的设计和分析直接影响其检测效率和适用性。目前,检测设备受检测原理限制,存在结构设计复杂、适用性有限、检测效率低等缺点。我们设计了一套完整的多肽气体检测芯片设计和分析方案。首先,我们从现有的多肽-气体亲和性数据集中选择了特异性和高亲和性的多肽组合。然后,根据多肽对不同气体亲和力的变化对多肽芯片的排列进行分组。每组中的多肽根据其亲和力水平进行排列,从而在芯片设计的区分度和灵活性之间取得平衡。最后,我们根据实际数据构建的参考亲和力矩阵生成模拟数据,对分析方法进行了评估。由于芯片设计对亲和性数据的预处理作用,所有方法都能有效完成气体分类。在气体浓度预测任务中,我们的方法将均方误差降至 0.41,明显优于其他方法。该气体检测方案缩短了芯片设计和分析方法的开发周期,充分利用了多肽的特异性,提高了气体分析的有效性,体现了气体检测芯片的敏捷开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Universal strategy for rapid design and analysis of gas detection peptide chips with positional preference

The design and analysis of gas detection chips directly affect their detection efficiency and applicability. Detection devices are currently restricted by detection principles, facing drawbacks like intricate structural design, limited applicability, and low detection efficiency. We have designed a complete set of design and analysis scheme for a peptide gas detection chip. First, we selected specific and high-affinity peptide combinations from existing peptide-gas affinity datasets. Then, the peptide chip's arrangement was grouped according to the variations in peptides' affinity towards different gases. Peptides were arranged based on their affinity levels within each group, striking a balance between discrimination and flexibility in the design of the chip. Finally, we evaluated the analysis methods by generating simulated data based on a reference affinity matrix constructed from actual data. Due to the preprocessing role of chip design on affinity data, all methods can effectively accomplish gas classification. In gas concentration prediction tasks, our method reduced mean square error to 0.41, significantly outperforming other methods. This gas detection scheme shortens the development cycle of chip design and analysis methods, fully utilizing the specificity of peptides, enhancing gas analysis effectiveness, and demonstrating the agile development of gas detection chips.

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来源期刊
Sensing and Bio-Sensing Research
Sensing and Bio-Sensing Research Engineering-Electrical and Electronic Engineering
CiteScore
10.70
自引率
3.80%
发文量
68
审稿时长
87 days
期刊介绍: Sensing and Bio-Sensing Research is an open access journal dedicated to the research, design, development, and application of bio-sensing and sensing technologies. The editors will accept research papers, reviews, field trials, and validation studies that are of significant relevance. These submissions should describe new concepts, enhance understanding of the field, or offer insights into the practical application, manufacturing, and commercialization of bio-sensing and sensing technologies. The journal covers a wide range of topics, including sensing principles and mechanisms, new materials development for transducers and recognition components, fabrication technology, and various types of sensors such as optical, electrochemical, mass-sensitive, gas, biosensors, and more. It also includes environmental, process control, and biomedical applications, signal processing, chemometrics, optoelectronic, mechanical, thermal, and magnetic sensors, as well as interface electronics. Additionally, it covers sensor systems and applications, µTAS (Micro Total Analysis Systems), development of solid-state devices for transducing physical signals, and analytical devices incorporating biological materials.
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