对 203 名视网膜母细胞瘤患者进行基因型-表型综合研究

IF 3 2区 医学 Q1 OPHTHALMOLOGY
Yoo Jin Lee , Jeong Hun Kim , Sang-Yeon Lee , Dong Hyun Jo
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引用次数: 0

摘要

视网膜母细胞瘤是儿童中最常见的眼内肿瘤,是由 RB1 基因的双拷贝失活引起的。在视网膜母细胞瘤患者及其家庭中鉴定 RB1 基因变异对于早期诊断和预防至关重要。本研究对 203 名视网膜母细胞瘤患者的基因组 DNA 进行了基因检测,采用直接测序和多重连接依赖性探针扩增(MLPA)检测相结合的方法进行基因型与表型相关性研究。在 203 例患者中,有 80 例发现了 65 个种系变异,其中 67 例为双侧视网膜母细胞瘤,13 例为单侧视网膜母细胞瘤。双侧和单侧病例的变异检出率分别为 88% 和 10%。发现了 18 个新变异。根据变异的存在、变异模式、位置、分子后果和致病性对变异进行了分类。随后,对203名患者的基因型和表型进行了评估。变异与诊断时的年龄(p < 0.001)、侧位(p < 0.001)和肿瘤大小(p = 0.010)有关。变异的分子后果与侧位(p <0.001)和肿瘤大小(p = 0.001)有关。变体的致病性与诊断年龄(p = 0.001)、侧位(p = 0.0212)、治疗反应(p = 0.0470)和肿瘤大小(p = 0.002)有关。这些结果表明,患者的表型与种系 RB1 变异的固有特征有关。这些发现表明基因检测结果有可能应用于临床实践。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A comprehensive genotype-phenotype study in 203 individuals with retinoblastoma

Retinoblastoma is the most common intraocular tumor in children and is caused by biallelic inactivation of the RB1 gene. The identification of RB1 germline variants in patients with retinoblastoma and their families is critical for early diagnosis and prevention. In this study, genetic testing was conducted on the genomic DNA of 203 patients with retinoblastoma using a combined approach of direct sequencing and multiplex ligation-dependent probe amplification (MLPA) assays for genotype-phenotype correlation studies. Sixty-five germline variants were identified in 80 of the 203 patients, with 67 bilateral and 13 unilateral retinoblastoma cases. The variant detection rates in the bilateral and unilateral cases were 88% and 10%, respectively. Eighteen novel variants were identified. Variants were classified according to their presence, mutation pattern, location, molecular consequences, and pathogenicity. Subsequently, the genotypes and phenotypes of the 203 patients were evaluated. Variants were associated with age at diagnosis (p < 0.001), laterality (p < 0.001), and tumor size (p = 0.010). The molecular consequences of the variants were related to laterality (p < 0.001) and tumor size (p = 0.001). The pathogenicity of the variants was associated with age at diagnosis (p = 0.001), laterality (p = 0.0212), treatment response (p = 0.0470), and tumor size (p = 0.002). These results suggest that patient phenotypes are associated with the inherent characteristics of germline RB1 variants. These findings indicate the potential application of genetic testing results in clinical practice.

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来源期刊
Experimental eye research
Experimental eye research 医学-眼科学
CiteScore
6.80
自引率
5.90%
发文量
323
审稿时长
66 days
期刊介绍: The primary goal of Experimental Eye Research is to publish original research papers on all aspects of experimental biology of the eye and ocular tissues that seek to define the mechanisms of normal function and/or disease. Studies of ocular tissues that encompass the disciplines of cell biology, developmental biology, genetics, molecular biology, physiology, biochemistry, biophysics, immunology or microbiology are most welcomed. Manuscripts that are purely clinical or in a surgical area of ophthalmology are not appropriate for submission to Experimental Eye Research and if received will be returned without review.
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