Flavio Luis de Oliveira, Guilherme Scotta Hentschke, João Morais, Raquel Silva, Pedro Cruz, Vitor M. Vasconcelos
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The 16S rRNA gene similarity between the types of both genera is only 93.1%. Morphologically, <i>Pseudolimnococcus</i> cells do not reach the original spherical shape before the next division or have aerotopes and firm mucilage, while <i>Limnococcus</i> cells reach the original shape, lack aerotopes, and have diffluent mucilage. <i>Eucapsopsis lusitanus</i> gen. et sp. nov. (Chroococcales) is morphologically similar to <i>Eucapsis</i> but differs from it by having aerotopes and diffluent envelope. <i>Eucapsis</i> lacks aerotopes and has firm mucilaginous envelopes, rarely diffluent. Both genera are phylogenetically very distant from each other and have only 90.68% 16S rRNA gene similarity. <i>Pseudoacaryochloris arrabidensis</i> gen. et sp. nov. (Acaryochloridales) differs from <i>Acaryochloris</i> by the lack of mucilaginous envelope, which is present in <i>Acaryochloris</i>. Both genera are phylogenetically distant and have only 94.1% 16S rRNA gene similarity. Moreover, <i>Acaryochloris</i> is marine (sponge symbiont), while <i>Pseudoacaryochloris</i> is from freshwater. <i>Vasconcelosia minhoensis</i> gen. et sp. nov. (Nodosilineales) is phylogenetically related to <i>Cymatolege</i> but has only 94.3% similarity with this genus. Morphologically both genera are distinct. <i>Vasconcelosia</i> has a <i>Romeria</i>-like structure, while <i>Cymatolege</i> has a <i>Phormidium</i>-like structure. In all cases the 16S-23S ITS rRNA region secondary structures are in agreement with the other analyses. These novel genera expand the diversity of cyanobacteria in culture collections.</p>","PeriodicalId":16831,"journal":{"name":"Journal of Phycology","volume":null,"pages":null},"PeriodicalIF":2.8000,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Exploring the cyanobacterial diversity in Portugal: Description of four new genera from LEGE-CC using the polyphasic approach\",\"authors\":\"Flavio Luis de Oliveira, Guilherme Scotta Hentschke, João Morais, Raquel Silva, Pedro Cruz, Vitor M. Vasconcelos\",\"doi\":\"10.1111/jpy.13502\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Culture collections such as the Blue Biotechnology and Ecotoxicology Culture Collection (LEGE-CC) hold approximately 1200 cyanobacterial strains and are critical community resources. However, many isolates in this and other collections have not been described with a polyphasic approach, and this limits further study. Here, we employed a polyphasic methodology that integrates 16S rRNA gene phylogenetic analyses, similarity (<i>p</i>-distance), 16S-23S ITS rRNA region secondary structures, morphological analyses, and habitat assessments to describe four novel cyanobacterial genera from the LEGE-CC, Portugal. <i>Pseudolimnococcus planktonicus</i> gen. et sp. nov. (Chroococcales) is phylogenetically and morphologically related to <i>Limnococcus</i>. The 16S rRNA gene similarity between the types of both genera is only 93.1%. Morphologically, <i>Pseudolimnococcus</i> cells do not reach the original spherical shape before the next division or have aerotopes and firm mucilage, while <i>Limnococcus</i> cells reach the original shape, lack aerotopes, and have diffluent mucilage. <i>Eucapsopsis lusitanus</i> gen. et sp. nov. (Chroococcales) is morphologically similar to <i>Eucapsis</i> but differs from it by having aerotopes and diffluent envelope. <i>Eucapsis</i> lacks aerotopes and has firm mucilaginous envelopes, rarely diffluent. Both genera are phylogenetically very distant from each other and have only 90.68% 16S rRNA gene similarity. <i>Pseudoacaryochloris arrabidensis</i> gen. et sp. nov. (Acaryochloridales) differs from <i>Acaryochloris</i> by the lack of mucilaginous envelope, which is present in <i>Acaryochloris</i>. Both genera are phylogenetically distant and have only 94.1% 16S rRNA gene similarity. Moreover, <i>Acaryochloris</i> is marine (sponge symbiont), while <i>Pseudoacaryochloris</i> is from freshwater. <i>Vasconcelosia minhoensis</i> gen. et sp. nov. (Nodosilineales) is phylogenetically related to <i>Cymatolege</i> but has only 94.3% similarity with this genus. 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引用次数: 0
摘要
蓝色生物技术和生态毒理学培养物保藏中心(LEGE-CC)等培养物保藏中心拥有约 1200 株蓝藻菌株,是重要的群落资源。然而,该蓝藻生物群和其他蓝藻生物群中的许多分离菌株尚未用多相方法进行描述,这限制了进一步的研究。在此,我们采用了一种多相方法,综合运用 16S rRNA 基因系统进化分析、相似性(p-距离)、16S-23S ITS rRNA 区域二级结构、形态分析和生境评估,描述了葡萄牙 LEGE-CC 中的四个新蓝藻属。Pseudolimnococcus planktonicus gen.这两个属的 16S rRNA 基因相似度仅为 93.1%。从形态上看,Pseudolimnococcus 的细胞在下一次分裂前不能达到原来的球形,或具有气孔和坚固的粘液,而 Limnococcus 的细胞能达到原来的形状,缺乏气孔,具有扩散性粘液。Eucapsopsis lusitanus gen. et sp.Eucapsis 缺乏气孔,有坚固的粘液包膜,很少扩散。这两个属在系统发育上相距甚远,16S rRNA 基因相似度仅为 90.68%。Pseudoacaryochloris arrabidensis gen.这两个属在系统发育上距离较远,16S rRNA 基因相似度仅为 94.1%。此外,Acaryochloris 是海洋生物(海绵共生生物),而 Pseudoacaryochloris 来自淡水。Vasconcelosia minhoensis gen. et sp. nov.(Nodosilineales)在系统发育上与 Cymatolege 有亲缘关系,但与该属的相似度仅为 94.3%。从形态上看,这两个属是不同的。Vasconcelosia 具有类似 Romeria 的结构,而 Cymatolege 具有类似 Phormidium 的结构。在所有情况下,16S-23S ITS rRNA 区域的二级结构都与其他分析结果一致。这些新属扩大了培养物中蓝藻的多样性。
Exploring the cyanobacterial diversity in Portugal: Description of four new genera from LEGE-CC using the polyphasic approach
Culture collections such as the Blue Biotechnology and Ecotoxicology Culture Collection (LEGE-CC) hold approximately 1200 cyanobacterial strains and are critical community resources. However, many isolates in this and other collections have not been described with a polyphasic approach, and this limits further study. Here, we employed a polyphasic methodology that integrates 16S rRNA gene phylogenetic analyses, similarity (p-distance), 16S-23S ITS rRNA region secondary structures, morphological analyses, and habitat assessments to describe four novel cyanobacterial genera from the LEGE-CC, Portugal. Pseudolimnococcus planktonicus gen. et sp. nov. (Chroococcales) is phylogenetically and morphologically related to Limnococcus. The 16S rRNA gene similarity between the types of both genera is only 93.1%. Morphologically, Pseudolimnococcus cells do not reach the original spherical shape before the next division or have aerotopes and firm mucilage, while Limnococcus cells reach the original shape, lack aerotopes, and have diffluent mucilage. Eucapsopsis lusitanus gen. et sp. nov. (Chroococcales) is morphologically similar to Eucapsis but differs from it by having aerotopes and diffluent envelope. Eucapsis lacks aerotopes and has firm mucilaginous envelopes, rarely diffluent. Both genera are phylogenetically very distant from each other and have only 90.68% 16S rRNA gene similarity. Pseudoacaryochloris arrabidensis gen. et sp. nov. (Acaryochloridales) differs from Acaryochloris by the lack of mucilaginous envelope, which is present in Acaryochloris. Both genera are phylogenetically distant and have only 94.1% 16S rRNA gene similarity. Moreover, Acaryochloris is marine (sponge symbiont), while Pseudoacaryochloris is from freshwater. Vasconcelosia minhoensis gen. et sp. nov. (Nodosilineales) is phylogenetically related to Cymatolege but has only 94.3% similarity with this genus. Morphologically both genera are distinct. Vasconcelosia has a Romeria-like structure, while Cymatolege has a Phormidium-like structure. In all cases the 16S-23S ITS rRNA region secondary structures are in agreement with the other analyses. These novel genera expand the diversity of cyanobacteria in culture collections.
期刊介绍:
The Journal of Phycology was founded in 1965 by the Phycological Society of America. All aspects of basic and applied research on algae are included to provide a common medium for the ecologist, physiologist, cell biologist, molecular biologist, morphologist, oceanographer, taxonomist, geneticist, and biochemist. The Journal also welcomes research that emphasizes algal interactions with other organisms and the roles of algae as components of natural ecosystems.
All aspects of basic and applied research on algae are included to provide a common medium for the ecologist, physiologist, cell biologist, molecular biologist, morphologist, oceanographer, acquaculturist, systematist, geneticist, and biochemist. The Journal also welcomes research that emphasizes algal interactions with other organisms and the roles of algae as components of natural ecosystems.