结合生物信息学对慢性萎缩性胃炎大鼠体内小建中堂代谢的研究

IF 1.8 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Jun Jie Guo, Wen Tian Lu, Yue Tao Liu
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引用次数: 0

摘要

小建中汤根据中医理论具有温中补虚、缓急止痛的作用,能够治疗脾虚型慢性萎缩性胃炎(CAG)。盲肠内容物中的中药代谢产物是肠道细菌和宿主的常见代谢产物,可反映疾病状态下的代谢状况。本研究结合盲肠代谢物分析和生物信息学研究了 XJZT 对 CAG 的作用。首先利用超高效液相色谱-四极杆-飞行时间质谱(UHPLC-Q-TOF/MS)鉴定了XJZT盲肠代谢物中的9种原型成分和144种代谢物,这些代谢物经历了氧化、还原、甲基化和葡萄糖醛酸反应等代谢过程,而且在肠道菌群存在的情况下,不同的原型化合物可能会代谢成相同的代谢物。生物信息学进一步将这些代谢物与疾病和肠道菌群联系起来。通过 Cytoscape 筛选了成分和靶标,关键靶标和核心成分的分子对接显示出良好的结合能力。该研究为探索中药方剂的作用机制提供了重要信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Study on the metabolism of Xiao–Jian–Zhong–Tang in rats with chronic atrophic gastritis coupled with bioinformatics

Xiao–Jian–Zhong–Tang (XJZT) has the effect of warming the middle and tonifying the deficiency, easing the urgency and relieving pain according to the theory of traditional Chinese medicine (TCM), and is able to treat spleen deficiency type chronic atrophic gastritis (CAG). Metabolites of TCM in cecum contents are common metabolites of intestinal bacteria and hosts, which can reflect the metabolic status in disease states. The present work was performed to study the effect of XJZT against CAG coupled with the cecal metabolites analysis and bioinformatics. A total of nine prototypical components and 144 metabolites were firstly identified in the cecum metabolites of XJZT using ultra-high performance liquid chromatography added to the quadrupole-time of flight mass spectrometry (UHPLC-Q-TOF/MS), which underwent the metabolism of oxidation, reduction, methylation, and glucuronic acid reaction Furthermore, different prototypical compounds might metabolize into identical metabolites in the presence of intestinal flora. Bioinformatics was further used to correlate these metabolites with the disease and intestinal flora. Components and targets were screened by Cytoscape, and molecular docking of key targets and core components showed good binding ability. This study provided important information for exploring the mechanism of TCM formulae.

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来源期刊
Biomedical Chromatography
Biomedical Chromatography 生物-分析化学
CiteScore
3.60
自引率
5.60%
发文量
268
审稿时长
2.3 months
期刊介绍: Biomedical Chromatography is devoted to the publication of original papers on the applications of chromatography and allied techniques in the biological and medical sciences. Research papers and review articles cover the methods and techniques relevant to the separation, identification and determination of substances in biochemistry, biotechnology, molecular biology, cell biology, clinical chemistry, pharmacology and related disciplines. These include the analysis of body fluids, cells and tissues, purification of biologically important compounds, pharmaco-kinetics and sequencing methods using HPLC, GC, HPLC-MS, TLC, paper chromatography, affinity chromatography, gel filtration, electrophoresis and related techniques.
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