细菌 LPMO 的动力学和底物特异性测定

IF 11.3 1区 化学 Q1 CHEMISTRY, PHYSICAL
Alan Carletti, Florian Csarman, Marco Sola, Gianantonio Battistuzzi, Roland Ludwig, Giulia Di Rocco
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引用次数: 0

摘要

溶解多糖单氧酶(LPMOs)是过去十年中发现的铜酶。它们在可持续过程中降解难降解底物方面的重要性现已得到充分证实;然而,过氧酶的催化机理尚未得到充分了解。这也是因为对反应动力学的研究必须处理多种变量,包括底物的性质、不需要的副反应的存在以及在 H2O2 作为共底物存在时蛋白质的低稳定性。在这项工作中,研究了 AA10 家族的三种细菌 LPMOs:它们分别是假单胞菌 AA10(PpAA10)、链霉菌 AA10B(ScAA10B)和 AA10C(ScAA10C)。首先通过 ATR-FTIR 对它们针对特定底物的活性进行了定性评估,然后使用基于 H2O2 消耗量检测的安培测定法来确定它们的电化学动力学常数。这样就可以确定不同底物上的周转次数(TNs)和总周转次数(TTNs)。ScAA10C 和 ScAAA10B 在纳米结晶纤维素上的表现最好,TNs 分别为 3.81 和 2.88 s-1,TTNs 分别为 1208 和 735。PpAA10 在 β-几丁质上具有活性,其 TN 为 1.02 s-1,TTN 为 61,这为了解它们的底物特异性和稳定性提供了宝贵的信息。虽然发现其初始速率低于真菌 LPMOs,但随着时间的推移,在更多结晶底物上以及在碳水化合物结合模块(CBM)存在的情况下,酶的稳定性增加,产生的活性值与真菌 LPMOs 相当。此外,CBM 的存在使 LPMO 更有效地消耗 H2O2,从而提高了酶的活性,并增强了抗氧化失活的能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Kinetic and Substrate Specificity Determination of Bacterial LPMOs
Lytic polysaccharide monooxygenases (LPMOs) are copper enzymes discovered in the past decade. Their importance in the degradation of recalcitrant substrates in sustainable processes is now well established; however, the catalytic peroxygenase mechanism has yet to be fully understood. This is also because the study of reaction kinetics has to deal with multiple variables, including the nature of the substrates, the presence of unwanted side reactions, and the low protein stability in the presence of H2O2 as the cosubstrate. In this work, three bacterial LPMOs from the AA10 family were investigated: Pseudomonas putida AA10 (PpAA10), Streptomyces coelicolor AA10B (ScAA10B), and AA10C (ScAA10C). Their activity against specific substrates was initially evaluated by ATR-FTIR for a qualitative characterization, and then, to determine electrochemically their kinetic constants, an amperometric assay based on the detection of the H2O2 consumption was used. This allowed the determination of turnover numbers (TNs) and total turnover numbers (TTNs) on different substrates. The best performance was obtained with ScAA10C and ScAAA10B on nanocrystalline cellulose with TNs of 3.81 and 2.88 s–1, respectively, and TTNs of 1208 and 735, respectively. PpAA10 is active on β-chitin with a TN of 1.02 s–1 and a TTN of 61, providing valuable insight into their substrate specificity and stability. Although the initial rates were found to be lower than those for fungal LPMOs, the enzyme stability over time increased on more crystalline substrates and in the presence of the carbohydrate-binding module (CBM), yielding activity values comparable to those for fungal LPMOs. Moreover, the presence of the CBM resulted in a more efficient consumption of H2O2 by LPMO, leading to improved enzymatic activity and increased resistance to oxidative inactivation.
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来源期刊
ACS Catalysis
ACS Catalysis CHEMISTRY, PHYSICAL-
CiteScore
20.80
自引率
6.20%
发文量
1253
审稿时长
1.5 months
期刊介绍: ACS Catalysis is an esteemed journal that publishes original research in the fields of heterogeneous catalysis, molecular catalysis, and biocatalysis. It offers broad coverage across diverse areas such as life sciences, organometallics and synthesis, photochemistry and electrochemistry, drug discovery and synthesis, materials science, environmental protection, polymer discovery and synthesis, and energy and fuels. The scope of the journal is to showcase innovative work in various aspects of catalysis. This includes new reactions and novel synthetic approaches utilizing known catalysts, the discovery or modification of new catalysts, elucidation of catalytic mechanisms through cutting-edge investigations, practical enhancements of existing processes, as well as conceptual advances in the field. Contributions to ACS Catalysis can encompass both experimental and theoretical research focused on catalytic molecules, macromolecules, and materials that exhibit catalytic turnover.
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