CXCR1和CXCR2是溃疡性结肠炎中与细胞外陷阱相关的潜在中性粒细胞治疗靶标:孟德尔随机化、共定位和转录组分析的启示

IF 8.3 2区 材料科学 Q1 MATERIALS SCIENCE, MULTIDISCIPLINARY
Yichuan Xv, Yiyi Feng, Jiang Lin
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引用次数: 0

摘要

目的已有大量证据表明,中性粒细胞胞外捕获物(NET)的形成有助于溃疡性结肠炎(UC)的炎症级联反应。然而,这一过程的确切调控机制仍然难以捉摸。本研究旨在确定NET相关基因在UC中的作用,并揭示可能的机制。方法我们采用双样本MR方法,利用全基因组关联研究(12,366例病例与33,609例对照)和FinnGen(8,279例病例与261,098例对照)的汇总数据,研究了NET相关基因(NRGs)与UC之间的相关性。主要分析采用了反方差加权法,并辅以 MR-Egger 法和加权中值法。为排除所使用的工具变量之间的异质性和多义性干扰,进行了敏感性分析。共定位分析用于确定已识别的 NRGs 和 UC 是否具有共同的偶然变异。进行了跨组织表达分析以确定目标NRGs的表达模式,同时进行了多基因相关性分析和GSEA分析以探索目标NRGs促进UC和NET形成的机制。结果经过两个数据集的验证,7个NRGs与UC风险相关。ITGB2的高表达与UC风险增加相关,而CXCR1、CXCR2、IRAK4、MAPK3、SIGLEC14和SLC22A4的表达与UC风险成反比。共定位分析支持 CXCR1/2 与 UC 风险之间的相关性。表达分析表明,CXCR1/2在外周血中下调,但在结肠组织中上调。GSEA分析和相关性分析表明,CXCR1/2分别通过中性粒细胞趋化和PAD4介导的途径促进UC和NET的形成。免疫组化结果证实了 CXCR1/2 在 UC 患者结肠组织中的高表达。结论我们的研究通过多种方法的论证,在所有 NRGs 中发现了 CXCR1/2 在 UC 中的候选靶点,为我们揭示 UC 发病机制中 NET 形成的调控机制提供了新的思路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
CXCR1 and CXCR2 are potential neutrophil extracellular trap-related treatment targets in ulcerative colitis: insights from Mendelian randomization, colocalization and transcriptomic analysis
ObjectivesThere is already substantial evidence indicating that neutrophil extracellular trap (NET) formation contributes to the inflammatory cascade in ulcerative colitis (UC). However, the precise regulatory mechanisms governing this process remain elusive. This study aimed to determine the role of NET-related genes in UC and reveal possible mechanisms.MethodsEmploying a two-sample MR methodology, we investigated the correlations between NET-associated genes (NRGs) and UC with summary data derived from a genome-wide association study (12,366 cases vs. 33,609 controls) and FinnGen (8,279 cases vs. 261,098 controls). The main analysis employed the inverse variance weighted method, supplemented by the MR-Egger method and weighted median method. Sensitivity analysis was conducted to rule out the interference of heterogeneity and pleiotropy among utilized instrument variables. The colocalization analysis was used to determine whether the identified NRGs and UC shared casual variants. Cross-tissue expression analysis was performed to characterize the expression patterns of target NRGs, while multi-gene correlation analysis and GSEA analysis were conducted to explore the mechanisms by which target NRGs promote UC and NET formation. Immunohistochemistry was used to validate the protein expression of target NRGs in the colon tissue of UC patients.ResultsAfter the validation of two datasets, seven NRGs were associated with the risk of UC. The higher expression of ITGB2 was associated with increased UC risk, while the expression of CXCR1, CXCR2, IRAK4, MAPK3, SIGLEC14, and SLC22A4 were inversely associated with UC risk. Colocalization analysis supported the correlation between CXCR1/2 and UC risk. Expression analysis indicated that CXCR1/2 were down-regulated in peripheral blood, but up-regulated in colon tissue. GSEA analysis and correlation analysis indicated that CXCR1/2 promoted UC and NET formation through neutrophil chemotaxis and PAD4-mediated pathways, separately. Immunohistochemical results confirmed the high expression of CXCR1/2 in colon tissues of UC patients.ConclusionsOur study identified CXCR1/2 as candidate targets in UC among all NRGs through multi-method argumentation, providing new insights of the regulation mechanisms of NET formation in the pathogenesis of UC.
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来源期刊
ACS Applied Materials & Interfaces
ACS Applied Materials & Interfaces 工程技术-材料科学:综合
CiteScore
16.00
自引率
6.30%
发文量
4978
审稿时长
1.8 months
期刊介绍: ACS Applied Materials & Interfaces is a leading interdisciplinary journal that brings together chemists, engineers, physicists, and biologists to explore the development and utilization of newly-discovered materials and interfacial processes for specific applications. Our journal has experienced remarkable growth since its establishment in 2009, both in terms of the number of articles published and the impact of the research showcased. We are proud to foster a truly global community, with the majority of published articles originating from outside the United States, reflecting the rapid growth of applied research worldwide.
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