DUS-MAS:一种改进的标记辅助回交育种(MABB)方法,可获得更高的背景基因组和 DUS 性状恢复率

IF 1.6 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
Sudip Nandi, Abhijit Kumar Das, Shubhank Dixit, Yathish KR, Ashutosh Sawarkar
{"title":"DUS-MAS:一种改进的标记辅助回交育种(MABB)方法,可获得更高的背景基因组和 DUS 性状恢复率","authors":"Sudip Nandi, Abhijit Kumar Das, Shubhank Dixit, Yathish KR, Ashutosh Sawarkar","doi":"10.1007/s11105-024-01481-2","DOIUrl":null,"url":null,"abstract":"<p>Backcross breeding is used to transfer an desirable trait from donor to recurrent parent (RP), and it takes six to seven generations for 99% recovery of the recurrent parent genome (RPG). Marker-assisted backcross breeding (MABB) was proposed to accelerate the recovery of the RPG. Over the period of time, MABB has evolved as per the available resources and time frame. One of the major modifications is the number of foreground-selected individuals which are subjected to background selection. This number varied widely and lacked consensus in different studies. Further, the major drawback of the existing method is that the DUS traits are recorded directly in the improved lines. Once the traits are fixed in the finished product, there is no going back to bring the corresponding traits of RP. The modified MABB method (DUS-MAS) can ensure higher recovery of DUS traits and RPG. A yield index has also been developed for the identification of high yielding individuals in backcross generation. In DUS-MAS, the foreground-positive individuals are selected first, and then individuals with a higher yield index are selected. Thereafter, the foreground and yield index positive individuals are selected for higher recovery of DUS traits. Five such individuals are subjected to marker-based background recovery of which only two with the highest recovery were advanced to the next generation. All these steps are to be followed in BC<sub>1</sub>F<sub>1</sub>, BC<sub>2</sub>F<sub>1</sub>, and BC<sub>2</sub>F<sub>2</sub> generations. It substantially reduces the cost by reducing the use of laboratory chemicals by more than 75%.</p>","PeriodicalId":20215,"journal":{"name":"Plant Molecular Biology Reporter","volume":null,"pages":null},"PeriodicalIF":1.6000,"publicationDate":"2024-08-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"DUS-MAS: A Modified Marker-Assisted Backcross Breeding (MABB) Method for Higher Background Genome and DUS Trait Recovery\",\"authors\":\"Sudip Nandi, Abhijit Kumar Das, Shubhank Dixit, Yathish KR, Ashutosh Sawarkar\",\"doi\":\"10.1007/s11105-024-01481-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Backcross breeding is used to transfer an desirable trait from donor to recurrent parent (RP), and it takes six to seven generations for 99% recovery of the recurrent parent genome (RPG). Marker-assisted backcross breeding (MABB) was proposed to accelerate the recovery of the RPG. Over the period of time, MABB has evolved as per the available resources and time frame. One of the major modifications is the number of foreground-selected individuals which are subjected to background selection. This number varied widely and lacked consensus in different studies. Further, the major drawback of the existing method is that the DUS traits are recorded directly in the improved lines. Once the traits are fixed in the finished product, there is no going back to bring the corresponding traits of RP. The modified MABB method (DUS-MAS) can ensure higher recovery of DUS traits and RPG. A yield index has also been developed for the identification of high yielding individuals in backcross generation. In DUS-MAS, the foreground-positive individuals are selected first, and then individuals with a higher yield index are selected. Thereafter, the foreground and yield index positive individuals are selected for higher recovery of DUS traits. Five such individuals are subjected to marker-based background recovery of which only two with the highest recovery were advanced to the next generation. All these steps are to be followed in BC<sub>1</sub>F<sub>1</sub>, BC<sub>2</sub>F<sub>1</sub>, and BC<sub>2</sub>F<sub>2</sub> generations. It substantially reduces the cost by reducing the use of laboratory chemicals by more than 75%.</p>\",\"PeriodicalId\":20215,\"journal\":{\"name\":\"Plant Molecular Biology Reporter\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.6000,\"publicationDate\":\"2024-08-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Molecular Biology Reporter\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s11105-024-01481-2\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Molecular Biology Reporter","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s11105-024-01481-2","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

摘要

回交育种用于将理想性状从供体转移到复交亲本(RP),复交亲本基因组(RPG)的恢复需要六到七代才能达到 99%。为了加快 RPG 的恢复,有人提出了标记辅助回交育种(MABB)。随着时间的推移,MABB 根据可用资源和时间框架不断发展。其中一个主要的变化是需要进行背景选择的前景选择个体的数量。这一数量在不同的研究中差异很大,缺乏共识。此外,现有方法的主要缺点是直接记录改良品系的 DUS 性状。一旦改良品种的性状被固定下来,就无法再回过头来恢复 RP 的相应性状。改进的 MABB 方法(DUS-MAS)可确保更高的 DUS 性状和 RPG 恢复率。此外,还开发了一种产量指数,用于鉴定回交一代中的高产个体。在 DUS-MAS 中,首先选择前景阳性个体,然后选择产量指数较高的个体。之后,再选择前景和产量指数均为阳性的个体,以获得更高的 DUS 性状恢复率。对五个这样的个体进行基于标记的背景复原,其中只有两个复原率最高的个体才能进入下一代。所有这些步骤都将在 BC1F1、BC2F1 和 BC2F2 代中进行。通过减少 75% 以上的实验室化学品使用,该方法大大降低了成本。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

DUS-MAS: A Modified Marker-Assisted Backcross Breeding (MABB) Method for Higher Background Genome and DUS Trait Recovery

DUS-MAS: A Modified Marker-Assisted Backcross Breeding (MABB) Method for Higher Background Genome and DUS Trait Recovery

Backcross breeding is used to transfer an desirable trait from donor to recurrent parent (RP), and it takes six to seven generations for 99% recovery of the recurrent parent genome (RPG). Marker-assisted backcross breeding (MABB) was proposed to accelerate the recovery of the RPG. Over the period of time, MABB has evolved as per the available resources and time frame. One of the major modifications is the number of foreground-selected individuals which are subjected to background selection. This number varied widely and lacked consensus in different studies. Further, the major drawback of the existing method is that the DUS traits are recorded directly in the improved lines. Once the traits are fixed in the finished product, there is no going back to bring the corresponding traits of RP. The modified MABB method (DUS-MAS) can ensure higher recovery of DUS traits and RPG. A yield index has also been developed for the identification of high yielding individuals in backcross generation. In DUS-MAS, the foreground-positive individuals are selected first, and then individuals with a higher yield index are selected. Thereafter, the foreground and yield index positive individuals are selected for higher recovery of DUS traits. Five such individuals are subjected to marker-based background recovery of which only two with the highest recovery were advanced to the next generation. All these steps are to be followed in BC1F1, BC2F1, and BC2F2 generations. It substantially reduces the cost by reducing the use of laboratory chemicals by more than 75%.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Plant Molecular Biology Reporter
Plant Molecular Biology Reporter 生物-生化研究方法
CiteScore
4.20
自引率
0.00%
发文量
40
审稿时长
2.7 months
期刊介绍: The scope of the journal of Plant Molecular Biology Reporter has expanded to keep pace with new developments in molecular biology and the broad area of genomics. The journal now solicits papers covering myriad breakthrough technologies and discoveries in molecular biology, genomics, proteomics, metabolomics, and other ‘omics’, as well as bioinformatics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信