Heather A. Harrington , Mike Stillman , Alan Veliz-Cuba
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Algebraic network reconstruction of discrete dynamical systems
We present a computational algebra solution to reverse engineering the network structure of discrete dynamical systems from data. We use pseudomonomial ideals to determine dependencies between variables that encode constraints on the possible wiring diagrams underlying the process generating the discrete-time, continuous-space data. Our work assumes that each variable is either monotone increasing or decreasing. We prove that with enough data, even in the presence of small noise, our method can reconstruct the correct unique wiring diagram.
期刊介绍:
Interdisciplinary in its coverage, Advances in Applied Mathematics is dedicated to the publication of original and survey articles on rigorous methods and results in applied mathematics. The journal features articles on discrete mathematics, discrete probability theory, theoretical statistics, mathematical biology and bioinformatics, applied commutative algebra and algebraic geometry, convexity theory, experimental mathematics, theoretical computer science, and other areas.
Emphasizing papers that represent a substantial mathematical advance in their field, the journal is an excellent source of current information for mathematicians, computer scientists, applied mathematicians, physicists, statisticians, and biologists. Over the past ten years, Advances in Applied Mathematics has published research papers written by many of the foremost mathematicians of our time.