电微生物浓缩池是一种被忽视的地下微生物潜在能量守恒机制。

IF 4 2区 生物学 Q2 MICROBIOLOGY
Frontiers in Microbiology Pub Date : 2024-08-21 eCollection Date: 2024-01-01 DOI:10.3389/fmicb.2024.1407868
Ian P G Marshall
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引用次数: 0

摘要

热力学通过确定哪些成对的电子受体和供体将发生反应以产生放能反应(吉布斯自由能的净变化为负值),预测了许多不同种类的微生物新陈代谢。在深层地下等能量有限的环境中,这种方法可以揭示微生物新陈代谢中潜在的意想不到或违反直觉的能量来源。直到最近,这些热力学计算都是在假设反应式中出现在反应物和生成物一侧的化学物种具有恒定浓度的情况下进行的,因此不计入净浓度变化和反应的总体方向。这一假设是合理的,因为微生物太小(约 1 μm),任何显著的浓度差异都无法克服扩散作用。然而,最近的发现表明,通过导电丝状细菌、矿物传导性和生物膜传导性,反应的还原半球和氧化半球之间的距离可以大得多,从几毫米到几厘米不等。这意味着反应物和生成物的浓度确实可能不同,浓度差异可能导致吉布斯自由能的净负值变化。这甚至意味着,在电微生物浓缩池(EMCC)中,同一氧化还原反应同时进行正向和反向反应,可以推动能量守恒。本文提出了一个模型来研究这一现象,并预测在何种情况下可能会发生这种浓度驱动的新陈代谢。本文更详细地研究了氧气浓缩池、硫化物浓缩池和氢气浓缩池的具体情况。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Electromicrobiological concentration cells are an overlooked potential energy conservation mechanism for subsurface microorganisms.

Thermodynamics has predicted many different kinds of microbial metabolism by determining which pairs of electron acceptors and donors will react to produce an exergonic reaction (a negative net change in Gibbs free energy). In energy-limited environments, such as the deep subsurface, such an approach can reveal the potential for unexpected or counter-intuitive energy sources for microbial metabolism. Up until recently, these thermodynamic calculations have been carried out with the assumption that chemical species appearing on the reactant and product side of a reaction formula have a constant concentration, and thus do not count towards net concentration changes and the overall direction of the reaction. This assumption is reasonable considering microorganisms are too small (~1 μm) for any significant differences in concentration to overcome diffusion. However, recent discoveries have demonstrated that the reductive and oxidative halves of reactions can be separated by much larger distances, from millimetres to centimetres via conductive filamentous bacteria, mineral conductivity, and biofilm conductivity. This means that the concentrations of reactants and products can indeed be different, and that concentration differences can contribute to the net negative change in Gibbs free energy. It even means that the same redox reaction, simultaneously running in forward and reverse, can drive energy conservation, in an ElectroMicrobiological Concentration Cell (EMCC). This paper presents a model to investigate this phenomenon and predict under which circumstances such concentration-driven metabolism might take place. The specific cases of oxygen concentration cells, sulfide concentration cells, and hydrogen concentration cells are examined in more detail.

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来源期刊
CiteScore
7.70
自引率
9.60%
发文量
4837
审稿时长
14 weeks
期刊介绍: Frontiers in Microbiology is a leading journal in its field, publishing rigorously peer-reviewed research across the entire spectrum of microbiology. Field Chief Editor Martin G. Klotz at Washington State University is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.
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