{"title":"从海洋沉积物中分离出来的海洋hyphobacterium marinum sp.nov.和乳酸hyphobacterium lacteum sp.nov.。","authors":"Shi-Bo Zhao, Le Liu, Feng-Bai Lian, Zong-Jun Du","doi":"10.1099/ijsem.0.006512","DOIUrl":null,"url":null,"abstract":"<p><p>Two bacterial strains, Y60-23<sup>T</sup> and HN-65<sup>T</sup>, were isolated from marine sediment samples collected from Xiaoshi Island, Weihai, and Dongzhai Harbour, Haikou, PR China, respectively. Based on the 16S rRNA gene sequences, strain Y60-23<sup>T</sup> exhibited 96.0% similarity to its most related type strain <i>Hyphobacterium vulgare</i> KCTC 52487<sup>T</sup>, while strain HN-65<sup>T</sup> exhibited 97.3% similarity to its most related type strain <i>Hyphobacterium indicum</i> 2ED5<sup>T</sup>. The 16S rRNA gene sequence similarity between the two strains was 95.8%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> belonged to the genus <i>Hyphobacterium</i>. Cells of strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> were rod-shaped, Gram-stain-negative, aerobic, non-motile, prosthecate and multiplied by binary fission. The major cellular fatty acids (>10.0%) of strain Y60-23<sup>T</sup> were C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> and C<sub>17 : 0</sub>, while those of strain HN-65<sup>T</sup> were iso-C<sub>17 : 1</sub> <i> ω</i>9<i>c</i>, iso-C<sub>17 : 0</sub> and C<sub>18 : 1</sub> <i> ω</i>7<i>c</i>. The major respiratory quinone in both strains was ubiquinone-10 (Q-10) and the major polar lipids were monoglycosyl diglyceride, sulfoquinovosyl diacylglycerol and glucuronopyranosyl diglyceride. The genomic DNA G+C contents of strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> were 63.9 and 60.7 mol%, respectively. The average nucleotide identity value between the two strains was 72.1% and the DNA-DNA hybridization value was 18.4%, clearly distinguishing them from each other. According to the results of the phenotypic, chemotaxonomic, phylogenetic and genomic analyses, the two strains represented two novel species within the genus <i>Hyphobacterium</i>, for which the names <i>Hyphobacterium marinum</i> sp. nov. and <i>Hyphobacterium lacteum</i> sp. nov. were proposed with the type strains Y60-23<sup>T</sup> (=MCCC 1H01433<sup>T</sup>=KCTC 8172<sup>T</sup>) and HN-65<sup>T</sup> (=MCCC 1H01434<sup>T</sup>=KCTC 8169<sup>T</sup>), respectively.</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Hyphobacterium marinum</i> sp. nov. and <i>Hyphobacterium lacteum</i> sp. nov., isolated from marine sediment.\",\"authors\":\"Shi-Bo Zhao, Le Liu, Feng-Bai Lian, Zong-Jun Du\",\"doi\":\"10.1099/ijsem.0.006512\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two bacterial strains, Y60-23<sup>T</sup> and HN-65<sup>T</sup>, were isolated from marine sediment samples collected from Xiaoshi Island, Weihai, and Dongzhai Harbour, Haikou, PR China, respectively. Based on the 16S rRNA gene sequences, strain Y60-23<sup>T</sup> exhibited 96.0% similarity to its most related type strain <i>Hyphobacterium vulgare</i> KCTC 52487<sup>T</sup>, while strain HN-65<sup>T</sup> exhibited 97.3% similarity to its most related type strain <i>Hyphobacterium indicum</i> 2ED5<sup>T</sup>. The 16S rRNA gene sequence similarity between the two strains was 95.8%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> belonged to the genus <i>Hyphobacterium</i>. Cells of strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> were rod-shaped, Gram-stain-negative, aerobic, non-motile, prosthecate and multiplied by binary fission. The major cellular fatty acids (>10.0%) of strain Y60-23<sup>T</sup> were C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> and C<sub>17 : 0</sub>, while those of strain HN-65<sup>T</sup> were iso-C<sub>17 : 1</sub> <i> ω</i>9<i>c</i>, iso-C<sub>17 : 0</sub> and C<sub>18 : 1</sub> <i> ω</i>7<i>c</i>. The major respiratory quinone in both strains was ubiquinone-10 (Q-10) and the major polar lipids were monoglycosyl diglyceride, sulfoquinovosyl diacylglycerol and glucuronopyranosyl diglyceride. The genomic DNA G+C contents of strains Y60-23<sup>T</sup> and HN-65<sup>T</sup> were 63.9 and 60.7 mol%, respectively. The average nucleotide identity value between the two strains was 72.1% and the DNA-DNA hybridization value was 18.4%, clearly distinguishing them from each other. According to the results of the phenotypic, chemotaxonomic, phylogenetic and genomic analyses, the two strains represented two novel species within the genus <i>Hyphobacterium</i>, for which the names <i>Hyphobacterium marinum</i> sp. nov. and <i>Hyphobacterium lacteum</i> sp. nov. were proposed with the type strains Y60-23<sup>T</sup> (=MCCC 1H01433<sup>T</sup>=KCTC 8172<sup>T</sup>) and HN-65<sup>T</sup> (=MCCC 1H01434<sup>T</sup>=KCTC 8169<sup>T</sup>), respectively.</p>\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2024-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006512\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006512","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
Hyphobacterium marinum sp. nov. and Hyphobacterium lacteum sp. nov., isolated from marine sediment.
Two bacterial strains, Y60-23T and HN-65T, were isolated from marine sediment samples collected from Xiaoshi Island, Weihai, and Dongzhai Harbour, Haikou, PR China, respectively. Based on the 16S rRNA gene sequences, strain Y60-23T exhibited 96.0% similarity to its most related type strain Hyphobacterium vulgare KCTC 52487T, while strain HN-65T exhibited 97.3% similarity to its most related type strain Hyphobacterium indicum 2ED5T. The 16S rRNA gene sequence similarity between the two strains was 95.8%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains Y60-23T and HN-65T belonged to the genus Hyphobacterium. Cells of strains Y60-23T and HN-65T were rod-shaped, Gram-stain-negative, aerobic, non-motile, prosthecate and multiplied by binary fission. The major cellular fatty acids (>10.0%) of strain Y60-23T were C18 : 1 ω7c and C17 : 0, while those of strain HN-65T were iso-C17 : 1 ω9c, iso-C17 : 0 and C18 : 1 ω7c. The major respiratory quinone in both strains was ubiquinone-10 (Q-10) and the major polar lipids were monoglycosyl diglyceride, sulfoquinovosyl diacylglycerol and glucuronopyranosyl diglyceride. The genomic DNA G+C contents of strains Y60-23T and HN-65T were 63.9 and 60.7 mol%, respectively. The average nucleotide identity value between the two strains was 72.1% and the DNA-DNA hybridization value was 18.4%, clearly distinguishing them from each other. According to the results of the phenotypic, chemotaxonomic, phylogenetic and genomic analyses, the two strains represented two novel species within the genus Hyphobacterium, for which the names Hyphobacterium marinum sp. nov. and Hyphobacterium lacteum sp. nov. were proposed with the type strains Y60-23T (=MCCC 1H01433T=KCTC 8172T) and HN-65T (=MCCC 1H01434T=KCTC 8169T), respectively.