Bruno Henrique Dias de Oliva, Arthur Bossi do Nascimento, João Paulo de Oliveira, Gustavo Henrique Migliorini Guidone, Beatriz Lernic Schoeps, Luana Carvalho Silva, Mario Gabriel Lopes Barbosa, Victor Hugo Montini, Admilton Gonçalves de Oliveira Junior, Sérgio Paulo Dejato Rocha
{"title":"从基因组学角度研究诱发禽蜂窝组织炎的 mirabilis 变形杆菌菌株。","authors":"Bruno Henrique Dias de Oliva, Arthur Bossi do Nascimento, João Paulo de Oliveira, Gustavo Henrique Migliorini Guidone, Beatriz Lernic Schoeps, Luana Carvalho Silva, Mario Gabriel Lopes Barbosa, Victor Hugo Montini, Admilton Gonçalves de Oliveira Junior, Sérgio Paulo Dejato Rocha","doi":"10.1007/s42770-024-01508-6","DOIUrl":null,"url":null,"abstract":"<p><p>Proteus mirabilis, a microorganism distributed in soil, water, and animals, is clinically known for causing urinary tract infections in humans. However, recent studies have linked it to skin infections in broiler chickens, termed avian cellulitis, which poses a threat to animal welfare. While Avian Pathogenic Escherichia coli (APEC) is the primary cause of avian cellulitis, few cases of P. mirabilis involvement are reported, raising questions about the factors facilitating such occurrences. This study employed a pan-genomic approach to investigate whether unique genes exist in P. mirabilis strains causing avian cellulitis. The genome of LBUEL-A33, a P. mirabilis strain known to cause this infection, was assembled, and compared with other P. mirabilis strains isolated from poultry and other sources. Additionally, in silico serogroup analysis was conducted. Results revealed numerous genes unique to the LBUEL-A33 strain. No function in cellulitis was identified for these genes, and in silico investigation of the virulence potential of LBUEL-A33's exclusive proteins proved inconclusive. These findings support that multiple factors are necessary for P. mirabilis to cause avian cellulitis. Furthermore, this species likely employs its own unique arsenal of virulence factors, as many identified mechanisms are analogous to those of E. coli. While antigenic gene clusters responsible for serogroups were identified, no clear trend was observed, and the gene cluster of LBUEL-A33 did not show homology with any sequenced Proteus serogroups. These results reinforce the understanding that this disease is multifactorial, necessitating further research to unravel the mechanisms and underpin the development of control and prevention strategies.</p>","PeriodicalId":9090,"journal":{"name":"Brazilian Journal of Microbiology","volume":" ","pages":""},"PeriodicalIF":2.1000,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genomic insights into a Proteus mirabilis strain inducing avian cellulitis.\",\"authors\":\"Bruno Henrique Dias de Oliva, Arthur Bossi do Nascimento, João Paulo de Oliveira, Gustavo Henrique Migliorini Guidone, Beatriz Lernic Schoeps, Luana Carvalho Silva, Mario Gabriel Lopes Barbosa, Victor Hugo Montini, Admilton Gonçalves de Oliveira Junior, Sérgio Paulo Dejato Rocha\",\"doi\":\"10.1007/s42770-024-01508-6\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Proteus mirabilis, a microorganism distributed in soil, water, and animals, is clinically known for causing urinary tract infections in humans. However, recent studies have linked it to skin infections in broiler chickens, termed avian cellulitis, which poses a threat to animal welfare. While Avian Pathogenic Escherichia coli (APEC) is the primary cause of avian cellulitis, few cases of P. mirabilis involvement are reported, raising questions about the factors facilitating such occurrences. This study employed a pan-genomic approach to investigate whether unique genes exist in P. mirabilis strains causing avian cellulitis. The genome of LBUEL-A33, a P. mirabilis strain known to cause this infection, was assembled, and compared with other P. mirabilis strains isolated from poultry and other sources. Additionally, in silico serogroup analysis was conducted. Results revealed numerous genes unique to the LBUEL-A33 strain. No function in cellulitis was identified for these genes, and in silico investigation of the virulence potential of LBUEL-A33's exclusive proteins proved inconclusive. These findings support that multiple factors are necessary for P. mirabilis to cause avian cellulitis. Furthermore, this species likely employs its own unique arsenal of virulence factors, as many identified mechanisms are analogous to those of E. coli. While antigenic gene clusters responsible for serogroups were identified, no clear trend was observed, and the gene cluster of LBUEL-A33 did not show homology with any sequenced Proteus serogroups. These results reinforce the understanding that this disease is multifactorial, necessitating further research to unravel the mechanisms and underpin the development of control and prevention strategies.</p>\",\"PeriodicalId\":9090,\"journal\":{\"name\":\"Brazilian Journal of Microbiology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-09-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Brazilian Journal of Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s42770-024-01508-6\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brazilian Journal of Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s42770-024-01508-6","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
奇异变形杆菌是一种分布于土壤、水和动物中的微生物,临床上以引起人类泌尿道感染而闻名。然而,最近的研究表明,它与肉鸡皮肤感染(称为禽蜂窝组织炎)有关,对动物福利构成威胁。禽致病性大肠杆菌(APEC)是导致禽蜂窝织炎的主要原因,但很少有报道称奇异变形杆菌也会导致禽蜂窝织炎,这让人们对导致这种情况发生的因素产生了疑问。本研究采用了一种泛基因组学方法来研究引起禽蜂窝织炎的 P. mirabilis 菌株中是否存在独特的基因。研究人员组装了LBUEL-A33(一种已知会引起这种感染的奇异变形杆菌菌株)的基因组,并将其与从家禽和其他来源分离的其他奇异变形杆菌菌株进行了比较。此外,还进行了血清群分析。结果发现了许多 LBUEL-A33 菌株特有的基因。没有发现这些基因在蜂窝组织炎中的功能,而且对 LBUEL-A33 独有蛋白的毒力潜力进行的硅学研究也未得出结论。这些发现证明,奇异变形杆菌引起禽蜂窝组织炎需要多种因素。此外,该物种很可能使用了自己独特的毒力因子库,因为许多已确定的机制与大肠杆菌类似。虽然确定了血清群的抗原基因簇,但没有观察到明显的趋势,LBUEL-A33 的基因簇与任何已测序的变形杆菌血清群都没有同源性。这些结果使人们进一步认识到,这种疾病是由多种因素造成的,因此有必要开展进一步的研究,以揭示其中的机制,并为制定控制和预防战略提供依据。
Genomic insights into a Proteus mirabilis strain inducing avian cellulitis.
Proteus mirabilis, a microorganism distributed in soil, water, and animals, is clinically known for causing urinary tract infections in humans. However, recent studies have linked it to skin infections in broiler chickens, termed avian cellulitis, which poses a threat to animal welfare. While Avian Pathogenic Escherichia coli (APEC) is the primary cause of avian cellulitis, few cases of P. mirabilis involvement are reported, raising questions about the factors facilitating such occurrences. This study employed a pan-genomic approach to investigate whether unique genes exist in P. mirabilis strains causing avian cellulitis. The genome of LBUEL-A33, a P. mirabilis strain known to cause this infection, was assembled, and compared with other P. mirabilis strains isolated from poultry and other sources. Additionally, in silico serogroup analysis was conducted. Results revealed numerous genes unique to the LBUEL-A33 strain. No function in cellulitis was identified for these genes, and in silico investigation of the virulence potential of LBUEL-A33's exclusive proteins proved inconclusive. These findings support that multiple factors are necessary for P. mirabilis to cause avian cellulitis. Furthermore, this species likely employs its own unique arsenal of virulence factors, as many identified mechanisms are analogous to those of E. coli. While antigenic gene clusters responsible for serogroups were identified, no clear trend was observed, and the gene cluster of LBUEL-A33 did not show homology with any sequenced Proteus serogroups. These results reinforce the understanding that this disease is multifactorial, necessitating further research to unravel the mechanisms and underpin the development of control and prevention strategies.
期刊介绍:
The Brazilian Journal of Microbiology is an international peer reviewed journal that covers a wide-range of research on fundamental and applied aspects of microbiology.
The journal considers for publication original research articles, short communications, reviews, and letters to the editor, that may be submitted to the following sections: Biotechnology and Industrial Microbiology, Food Microbiology, Bacterial and Fungal Pathogenesis, Clinical Microbiology, Environmental Microbiology, Veterinary Microbiology, Fungal and Bacterial Physiology, Bacterial, Fungal and Virus Molecular Biology, Education in Microbiology. For more details on each section, please check out the instructions for authors.
The journal is the official publication of the Brazilian Society of Microbiology and currently publishes 4 issues per year.