Andreas Trojan, Emanuele Laurenzi, Stephan Jüngling, Sven Roth, Michael Kiessling, Ziad Atassi, Yannick Kadvany, Meinrad Mannhart, Christian Jackisch, Gerd Kullak-Ublick, Hans Friedrich Witschel
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Information on well-being, vital parameters, medication, and free text were also considered for establishing a hybrid ML model. The goal was to integrate both the strengths of ML in sifting through large amounts of data and the long-standing experience of human experts. Given the limitations of highly imbalanced datasets (where only very few adverse events are present) and the limitations of humans in overseeing all possible cause of such events, we hypothesize that it should be possible to combine both in order to partially overcome these limitations.</p><p><strong>Methods: </strong>The prediction of unplanned visits was achieved by employing a white-box ML algorithm (i.e., rule learner), which learned rules from patient data (i.e., ePROs, vital parameters, free text) that were captured via a medical device smartphone app. Those rules indicated situations where patients experienced unplanned visits and, hence, were captured as alert triggers in the EWS. Each rule was evaluated based on a cost matrix, where false negatives (FNs) have higher costs than false positives (FPs, i.e., false alarms). Rules were then ranked according to the costs and priority was given to the least expensive ones. Finally, the rules with higher priority were reviewed by two oncological experts for plausibility check and for extending them with additional conditions. This hybrid approach comprised the application of a sensitive ML algorithm producing several potentially unreliable, but fully human-interpretable and -modifiable rules, which could then be adjusted by human experts.</p><p><strong>Results: </strong>From a cohort of 214 patients and more than 16'000 available data entries, the machine-learned rule set achieved a recall of 19% on the entire dataset and a precision of 5%. We compared this performance to a set of conditions that a human expert had defined to predict adverse events. This \"human baseline\" did not discover any of the adverse events recorded in our dataset, i.e., it came with a recall and precision of 0%. Despite more plentiful results were expected by our machine learning approach, the involved medical experts a) had understood and were able to make sense of the rules and b) felt capable to suggest modification to the rules, some of which could potentially increase their precision. Suggested modifications of rules included e.g., adding or tightening certain conditions to make them less sensitive or changing the rule consequences: sometimes further monitoring the situation, applying certain test (such as a CRP test) or applying some simple pain-relieving measures was deemed sufficient, making a costly consultation with the physician unnecessary. We can thus conclude that it is possible to apply machine learning as an inspirational tool that can help human experts to formulate rules for an EWS. While humans seem to lack the ability to define such rules without such support, they are capable of modifying the rules to increase their precision and generalizability.</p><p><strong>Conclusions: </strong>Learning rules from dynamic ePRO datasets may be used to assist human experts in establishing an early warning system for cancer patients in outpatient settings.</p>","PeriodicalId":73078,"journal":{"name":"Frontiers in digital health","volume":null,"pages":null},"PeriodicalIF":3.2000,"publicationDate":"2024-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11349615/pdf/","citationCount":"0","resultStr":"{\"title\":\"Towards an early warning system for monitoring of cancer patients using hybrid interactive machine learning.\",\"authors\":\"Andreas Trojan, Emanuele Laurenzi, Stephan Jüngling, Sven Roth, Michael Kiessling, Ziad Atassi, Yannick Kadvany, Meinrad Mannhart, Christian Jackisch, Gerd Kullak-Ublick, Hans Friedrich Witschel\",\"doi\":\"10.3389/fdgth.2024.1443987\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>The use of smartphone apps in cancer patients undergoing systemic treatment can promote the early detection of symptoms and therapy side effects and may be supported by machine learning (ML) for timely adaptation of therapies and reduction of adverse events and unplanned admissions.</p><p><strong>Objective: </strong>We aimed to create an Early Warning System (EWS) to predict situations where supportive interventions become necessary to prevent unplanned visits. For this, dynamically collected standardized electronic patient reported outcome (ePRO) data were analyzed in context with the patient's individual journey. Information on well-being, vital parameters, medication, and free text were also considered for establishing a hybrid ML model. The goal was to integrate both the strengths of ML in sifting through large amounts of data and the long-standing experience of human experts. Given the limitations of highly imbalanced datasets (where only very few adverse events are present) and the limitations of humans in overseeing all possible cause of such events, we hypothesize that it should be possible to combine both in order to partially overcome these limitations.</p><p><strong>Methods: </strong>The prediction of unplanned visits was achieved by employing a white-box ML algorithm (i.e., rule learner), which learned rules from patient data (i.e., ePROs, vital parameters, free text) that were captured via a medical device smartphone app. Those rules indicated situations where patients experienced unplanned visits and, hence, were captured as alert triggers in the EWS. Each rule was evaluated based on a cost matrix, where false negatives (FNs) have higher costs than false positives (FPs, i.e., false alarms). Rules were then ranked according to the costs and priority was given to the least expensive ones. Finally, the rules with higher priority were reviewed by two oncological experts for plausibility check and for extending them with additional conditions. This hybrid approach comprised the application of a sensitive ML algorithm producing several potentially unreliable, but fully human-interpretable and -modifiable rules, which could then be adjusted by human experts.</p><p><strong>Results: </strong>From a cohort of 214 patients and more than 16'000 available data entries, the machine-learned rule set achieved a recall of 19% on the entire dataset and a precision of 5%. We compared this performance to a set of conditions that a human expert had defined to predict adverse events. This \\\"human baseline\\\" did not discover any of the adverse events recorded in our dataset, i.e., it came with a recall and precision of 0%. 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引用次数: 0
摘要
背景:在接受系统治疗的癌症患者中使用智能手机应用程序可促进症状和治疗副作用的早期检测,并可在机器学习(ML)的支持下及时调整疗法,减少不良事件和意外入院:我们的目标是创建一个早期预警系统(EWS),以预测在哪些情况下需要采取支持性干预措施来防止意外就诊。为此,我们结合患者的个人历程,对动态收集的标准化电子患者报告结果(ePRO)数据进行了分析。在建立混合 ML 模型时,还考虑了有关健康状况、生命参数、药物和自由文本的信息。我们的目标是将人工智能在筛选大量数据方面的优势与人类专家的长期经验相结合。考虑到高度不平衡数据集(只存在极少数不良事件)的局限性和人类在监督此类事件所有可能原因方面的局限性,我们假设可以将两者结合起来,以部分克服这些局限性:非计划就诊的预测是通过白盒 ML 算法(即规则学习器)实现的,该算法从通过医疗设备智能手机应用程序获取的患者数据(即 ePRO、生命参数、自由文本)中学习规则。这些规则显示了患者经历计划外就诊的情况,因此被作为警报触发器记录在 EWS 中。每条规则都根据成本矩阵进行评估,其中假阴性(FN)的成本高于假阳性(FP,即误报)。然后根据成本对规则进行排序,优先考虑成本最低的规则。最后,由两名肿瘤专家对优先级较高的规则进行审核,以检查其合理性,并通过附加条件对其进行扩展。这种混合方法包括应用敏感的 ML 算法,产生几条可能不可靠但完全可由人类解释和修改的规则,然后由人类专家对其进行调整:从 214 名患者和 16,000 多个可用数据条目中,机器学习的规则集在整个数据集上的召回率为 19%,精确率为 5%。我们将这一成绩与人类专家为预测不良事件而定义的一组条件进行了比较。这一 "人类基线 "没有发现我们数据集中记录的任何不良事件,即召回率和精确率均为 0%。尽管我们的机器学习方法有望获得更多的结果,但参与其中的医学专家们(a)已经理解并能够理解规则,(b)认为有能力对规则提出修改建议,其中一些建议有可能提高规则的精确度。建议对规则进行的修改包括增加或收紧某些条件,使其不那么敏感,或改变规则的后果:有时进一步监测情况、应用某些测试(如 CRP 测试)或应用一些简单的止痛措施就被认为是足够的,这样就不需要与医生进行昂贵的会诊。因此,我们可以得出这样的结论:可以将机器学习作为一种启发性工具,帮助人类专家制定 EWS 规则。虽然人类似乎缺乏在没有此类支持的情况下定义此类规则的能力,但他们有能力修改规则以提高其精确性和通用性:结论:从动态 ePRO 数据集中学习规则可用于协助人类专家为门诊环境中的癌症患者建立预警系统。
Towards an early warning system for monitoring of cancer patients using hybrid interactive machine learning.
Background: The use of smartphone apps in cancer patients undergoing systemic treatment can promote the early detection of symptoms and therapy side effects and may be supported by machine learning (ML) for timely adaptation of therapies and reduction of adverse events and unplanned admissions.
Objective: We aimed to create an Early Warning System (EWS) to predict situations where supportive interventions become necessary to prevent unplanned visits. For this, dynamically collected standardized electronic patient reported outcome (ePRO) data were analyzed in context with the patient's individual journey. Information on well-being, vital parameters, medication, and free text were also considered for establishing a hybrid ML model. The goal was to integrate both the strengths of ML in sifting through large amounts of data and the long-standing experience of human experts. Given the limitations of highly imbalanced datasets (where only very few adverse events are present) and the limitations of humans in overseeing all possible cause of such events, we hypothesize that it should be possible to combine both in order to partially overcome these limitations.
Methods: The prediction of unplanned visits was achieved by employing a white-box ML algorithm (i.e., rule learner), which learned rules from patient data (i.e., ePROs, vital parameters, free text) that were captured via a medical device smartphone app. Those rules indicated situations where patients experienced unplanned visits and, hence, were captured as alert triggers in the EWS. Each rule was evaluated based on a cost matrix, where false negatives (FNs) have higher costs than false positives (FPs, i.e., false alarms). Rules were then ranked according to the costs and priority was given to the least expensive ones. Finally, the rules with higher priority were reviewed by two oncological experts for plausibility check and for extending them with additional conditions. This hybrid approach comprised the application of a sensitive ML algorithm producing several potentially unreliable, but fully human-interpretable and -modifiable rules, which could then be adjusted by human experts.
Results: From a cohort of 214 patients and more than 16'000 available data entries, the machine-learned rule set achieved a recall of 19% on the entire dataset and a precision of 5%. We compared this performance to a set of conditions that a human expert had defined to predict adverse events. This "human baseline" did not discover any of the adverse events recorded in our dataset, i.e., it came with a recall and precision of 0%. Despite more plentiful results were expected by our machine learning approach, the involved medical experts a) had understood and were able to make sense of the rules and b) felt capable to suggest modification to the rules, some of which could potentially increase their precision. Suggested modifications of rules included e.g., adding or tightening certain conditions to make them less sensitive or changing the rule consequences: sometimes further monitoring the situation, applying certain test (such as a CRP test) or applying some simple pain-relieving measures was deemed sufficient, making a costly consultation with the physician unnecessary. We can thus conclude that it is possible to apply machine learning as an inspirational tool that can help human experts to formulate rules for an EWS. While humans seem to lack the ability to define such rules without such support, they are capable of modifying the rules to increase their precision and generalizability.
Conclusions: Learning rules from dynamic ePRO datasets may be used to assist human experts in establishing an early warning system for cancer patients in outpatient settings.