利用多组学方法改良小米的生物技术研究。

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY
Rushikesh Sanjay Mane, Bishun Deo Prasad, Sangita Sahni, Zeba Quaiyum, V. K. Sharma
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引用次数: 0

摘要

大量研究发现了主要作物中许多具有农业意义的重要基因。然而,对于像小米这样的 "孤儿 "作物,基因组研究却远远落后于主要作物。这种情况促使人们开始关注利用前沿方法探索小黍研究机会,尤其是手指稷。手指稷是一种粗粮,以其特殊的营养成分和抵御环境压力的能力而闻名,在应对不断升级的环境挑战方面,它是一种很有前途的气候智能型营养作物。现有的传统小米改良计划不足以有效解决全球饥饿问题。缺乏对高通量平台、基因组编辑、单体型育种和先进育种方法的利用,阻碍了对小米进行系统的多组学研究,而这些研究对于精确定位与农艺上重要的各种胁迫反应相关的关键基因至关重要。环境不确定性的增加扩大了作物改良预期进展与实际进展之间的差距。为了克服这些挑战,必须将高通量测序、快速育种、突变育种、基于单体型的育种、基因组选择、高通量表型分析、泛基因组学、基因组编辑等尖端多组学技术与深度学习和人工智能技术相结合,以加快小米的研究工作。由于缺乏多组学方法,育种者只能利用有限的现代工具来改良作物。因此,利用以前研究的数据集可以有效地实施必要的多组学干预措施,丰富小米的遗传资源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Biotechnological studies towards improvement of finger millet using multi-omics approaches

Biotechnological studies towards improvement of finger millet using multi-omics approaches

A plethora of studies have uncovered numerous important genes with agricultural significance in staple crops. However, when it comes to orphan crops like minor millet, genomic research lags significantly behind that of major crops. This situation has promoted a focus on exploring research opportunities in minor millets, particularly in finger millet, using cutting-edge methods. Finger millet, a coarse cereal known for its exceptional nutritional content and ability to withstand environmental stresses represents a promising climate-smart and nutritional crop in the battle against escalating environmental challenges. The existing traditional improvement programs for finger millet are insufficient to address global hunger effectively. The lack of utilization of high-throughput platforms, genome editing, haplotype breeding, and advanced breeding approaches hinders the systematic multi-omics studies on finger millet, which are essential for pinpointing crucial genes related to agronomically important and various stress responses. The growing environmental uncertainties have widened the gap between the anticipated and real progress in crop improvement. To overcome these challenges a combination of cutting-edge multi-omics techniques such as high-throughput sequencing, speed breeding, mutational breeding, haplotype-based breeding, genomic selection, high-throughput phenotyping, pangenomics, genome editing, and more along with integration of deep learning and artificial intelligence technologies are essential to accelerate research efforts in finger millet. The scarcity of multi-omics approaches in finger millet leaves breeders with limited modern tools for crop enhancement. Therefore, leveraging datasets from previous studies could prove effective in implementing the necessary multi-omics interventions to enrich the genetic resource in finger millet.

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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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