肠道微生物组和代谢组对炎症性肠病生物疗法反应的预测价值有限。

IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Gut Microbes Pub Date : 2024-01-01 Epub Date: 2024-08-21 DOI:10.1080/19490976.2024.2391505
Femke M Prins, Iwan J Hidding, Marjolein A Y Klaassen, Valerie Collij, Johannes P D Schultheiss, Werna T C Uniken Venema, Amber Bangma, Jurne B Aardema, Bernadien H Jansen, Wout G N Mares, Ben J M Witteman, Eleonora A M Festen, Gerard Dijkstra, Marijn C Visschedijk, Herma H Fidder, Arnau Vich Vila, Bas Oldenburg, Ranko Gacesa, Rinse K Weersma
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引用次数: 0

摘要

新的证据表明,肠道微生物组在预测炎症性肠病(IBD)患者对生物治疗的反应方面具有潜力。在这项前瞻性研究中,我们将临床数据、基于元基因组测序的肠道微生物组图谱和非靶向粪便代谢组学整合在一起,旨在预测维多珠单抗和乌司替尼的治疗反应。我们的目标是确定预测性生物标志物,并尝试复制以往研究中基于微生物组的信号。我们发现,与单纯的临床特征相比,肠道微生物组和粪便代谢物对治疗反应的预测作用微乎其微。在一个外部队列中测试我们确定的微生物比率,更加证实了微生物组缺乏预测能力。此外,我们无法证实之前发表的在类似规模队列中观察到的预测信号。总之,这些发现强调了外部验证和更大样本量的重要性,以便在可能的临床应用之前,更好地了解微生物组在生物制剂治疗 IBD 时对治疗结果的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Limited predictive value of the gut microbiome and metabolome for response to biological therapy in inflammatory bowel disease.

Emerging evidence suggests the gut microbiome's potential in predicting response to biologic treatments in patients with inflammatory bowel disease (IBD). In this prospective study, we aimed to predict treatment response to vedolizumab and ustekinumab, integrating clinical data, gut microbiome profiles based on metagenomic sequencing, and untargeted fecal metabolomics. We aimed to identify predictive biomarkers and attempted to replicate microbiome-based signals from previous studies. We found that the predictive utility of the gut microbiome and fecal metabolites for treatment response was marginal compared to clinical features alone. Testing our identified microbial ratios in an external cohort reinforced the lack of predictive power of the microbiome. Additionally, we could not confirm previously published predictive signals observed in similar sized cohorts. Overall, these findings highlight the importance of external validation and larger sample sizes, to better understand the microbiome's impact on therapy outcomes in the setting of biologicals in IBD before potential clinical implementation.

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来源期刊
Gut Microbes
Gut Microbes Medicine-Microbiology (medical)
CiteScore
18.20
自引率
3.30%
发文量
196
审稿时长
10 weeks
期刊介绍: The intestinal microbiota plays a crucial role in human physiology, influencing various aspects of health and disease such as nutrition, obesity, brain function, allergic responses, immunity, inflammatory bowel disease, irritable bowel syndrome, cancer development, cardiac disease, liver disease, and more. Gut Microbes serves as a platform for showcasing and discussing state-of-the-art research related to the microorganisms present in the intestine. The journal emphasizes mechanistic and cause-and-effect studies. Additionally, it has a counterpart, Gut Microbes Reports, which places a greater focus on emerging topics and comparative and incremental studies.
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