Adam19 缺陷影响肺功能:小鼠基因敲除模型的人类 GWAS 后续研究

IF 4.6 2区 医学 Q1 RESPIRATORY SYSTEM
Lung Pub Date : 2024-10-01 Epub Date: 2024-08-17 DOI:10.1007/s00408-024-00738-7
Huiling Li, John S House, Cody E Nichols, Artiom Gruzdev, James M Ward, Jian-Liang Li, Annah B Wyss, Ezazul Haque, Matthew L Edin, Susan A Elmore, Beth W Mahler, Laura M Degraff, Min Shi, Darryl C Zeldin, Stephanie J London
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引用次数: 0

摘要

目的:在全基因组关联研究(GWAS)中,有超过 550 个基因位点与人类肺功能相关;然而,大多数位点的因果作用仍不确定。在全基因组关联研究(GWAS)中,分解蛋白和金属蛋白酶结构域 19(ADAM19)的单核苷酸多态性一直与肺功能有关。因此,我们利用小鼠模型来研究 Adam19 与肺功能之间的因果关系:方法:我们创建了一个 Adam19 基因敲除(KO)小鼠模型,并使用 RNA-Seq 和 RT-qPCR 验证了基因靶向。使用双能 X 射线吸收测定法评估了小鼠的身体成分。使用 flexiVent 测量了小鼠的肺功能:与之前发表的文章相反,KO 并非新生儿致死性疾病。与野生型(WT)小鼠相比,KO 小鼠体重较轻,胫骨长度较短。它们的身体成分显示出较低的软体重、脂肪重量和骨矿物质含量。Adam19 KO 的基线呼吸系统弹性、分钟呼吸功、组织阻尼、组织弹性和 50% 强迫呼气流量均有所下降,但 FEV0.1 和 FVC 较高。暴露于 LPS 后,Adam19 KO 对甲氧胆碱的组织阻尼和组织弹性反应减弱。与 WT 相比,Adam19 KO 还表现出 LPS 给药后中性粒细胞向气道外渗的减少。对 KO 和 WT 肺部的 RNA-Seq 分析发现了几个与肺生物学和发病机制有关的差异表达基因(Cd300lg、Kpna2 和 Pttg1)。基因组富集分析确定了 TNF 通路的负富集:我们的小鼠研究结果支持 ADAM19 在调节肺功能中的因果作用,ADAM19 与人类 GWAS 有关联。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Adam19 Deficiency Impacts Pulmonary Function: Human GWAS Follow-up in a Mouse Knockout Model.

Adam19 Deficiency Impacts Pulmonary Function: Human GWAS Follow-up in a Mouse Knockout Model.

Purpose: Over 550 loci have been associated with human pulmonary function in genome-wide association studies (GWAS); however, the causal role of most remains uncertain. Single nucleotide polymorphisms in a disintegrin and metalloprotease domain 19 (ADAM19) are consistently related to pulmonary function in GWAS. Thus, we used a mouse model to investigate the causal link between Adam19 and pulmonary function.

Methods: We created an Adam19 knockout (KO) mouse model and validated the gene targeting using RNA-Seq and RT-qPCR. Mouse body composition was assessed using dual-energy X-ray absorptiometry. Mouse lung function was measured using flexiVent.

Results: Contrary to prior publications, the KO was not neonatal lethal. KO mice had lower body weight and shorter tibial length than wild-type (WT) mice. Their body composition revealed lower soft weight, fat weight, and bone mineral content. Adam19 KO had decreased baseline respiratory system elastance, minute work of breathing, tissue damping, tissue elastance, and forced expiratory flow at 50% forced vital capacity but higher FEV0.1 and FVC. Adam19 KO had attenuated tissue damping and tissue elastance in response to methacholine following LPS exposure. Adam19 KO also exhibited attenuated neutrophil extravasation into the airway after LPS administration compared to WT. RNA-Seq analysis of KO and WT lungs identified several differentially expressed genes (Cd300lg, Kpna2, and Pttg1) implicated in lung biology and pathogenesis. Gene set enrichment analysis identified negative enrichment for TNF pathways.

Conclusion: Our murine findings support a causal role of ADAM19, implicated in human GWAS, in regulating pulmonary function.

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来源期刊
Lung
Lung 医学-呼吸系统
CiteScore
9.10
自引率
10.00%
发文量
95
审稿时长
6-12 weeks
期刊介绍: Lung publishes original articles, reviews and editorials on all aspects of the healthy and diseased lungs, of the airways, and of breathing. Epidemiological, clinical, pathophysiological, biochemical, and pharmacological studies fall within the scope of the journal. Case reports, short communications and technical notes can be accepted if they are of particular interest.
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