Rui Chen, Jie Ren, Yifei Wang, Xing Zhang, Yifan Jia, Chang Liu, Kai Qu
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A prognostic risk model was then constructed after combining univariate, multivariate Cox regression and LASSO regression analysis to recognize nine ICD-associated molecules. Next, we stratified all OV patients into two subgroups according to the median value. The multivariate Cox regression analysis showed that the risk model could predict OV patient survival with good accuracy. The same results were also found in the validation set from GEO. We then compared the degree of immune cell infiltration in the tumor microenvironment between the two subgroups of OV patients, and revealed that the high-risk subtype had a higher degree of immune infiltration than the low-risk subtype. Additionally, in contrast to patients in the high-risk subgroup, those in the low-risk subgroup were more susceptible to chemotherapy. 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引用次数: 0
摘要
卵巢癌(OV)是一种恶性肿瘤,居妇科癌症之首,对妇女健康构成重大威胁。免疫性细胞死亡(ICD)可通过激活适应性免疫系统来调节细胞死亡。在此,我们旨在全面描述卵巢癌中ICD相关基因的特征,并研究其预后价值和在免疫疗法反应中的作用。在分析了癌症基因组图谱(The Cancer Genome Atlas)的数据集后,我们利用加权基因共表达网络分析筛选出了与卵巢癌中ICD基因密切相关的枢纽基因,并随后用基因表达总库(GEO)数据库中的卵巢癌样本进行了验证。然后,结合单变量、多变量 Cox 回归和 LASSO 回归分析,建立了一个预后风险模型,识别出九个 ICD 相关分子。接下来,我们根据中位值将所有 OV 患者分为两个亚组。多变量 Cox 回归分析表明,该风险模型能准确预测 OV 患者的生存率。来自 GEO 的验证集也得出了同样的结果。然后,我们比较了两个亚组 OV 患者肿瘤微环境中免疫细胞浸润的程度,结果显示高风险亚型的免疫浸润程度高于低风险亚型。此外,与高风险亚组患者相比,低风险亚组患者更容易接受化疗。总之,我们的研究提供了一个与 ICD 相关分子有关的独立且经过验证的模型,用于估计 OV 患者的预后、免疫浸润程度和化疗敏感性。
A Comprehensive Analysis Exploring the Impact of an Immunogenic Cell Death-Related Panel for Ovarian Cancer.
Ovarian cancer (OV) is a malignant tumor that ranks first among gynecological cancers, thus posing a significant threat to women's health. Immunogenic cell death (ICD) can regulate cell death by activating the adaptive immune system. Here, we aimed to comprehensively characterize the features of ICD-associated genes in ovarian cancer, and to investigate their prognostic value and role in the response to immunotherapy. After analyzing datasets from The Cancer Genome Atlas, we utilized weighted gene coexpression network analysis to screen for hub genes strongly correlated with ICD genes in OV, which was subsequently validated with OV samples from the Gene Expression Omnibus (GEO) database. A prognostic risk model was then constructed after combining univariate, multivariate Cox regression and LASSO regression analysis to recognize nine ICD-associated molecules. Next, we stratified all OV patients into two subgroups according to the median value. The multivariate Cox regression analysis showed that the risk model could predict OV patient survival with good accuracy. The same results were also found in the validation set from GEO. We then compared the degree of immune cell infiltration in the tumor microenvironment between the two subgroups of OV patients, and revealed that the high-risk subtype had a higher degree of immune infiltration than the low-risk subtype. Additionally, in contrast to patients in the high-risk subgroup, those in the low-risk subgroup were more susceptible to chemotherapy. In conclusion, our research offers an independent and validated model concerning ICD-related molecules to estimate the prognosis, degree of immune infiltration, and chemotherapy susceptibility in patients with OV.
期刊介绍:
Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.